RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 AKR1C3P42330 323 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 B3GNTL1Q67FW5 361 aaPredicted RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 CDC20BQ86Y33 519 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 DTWD2Q8NBA8 298 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 OR2M3Q8NG83 312 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM106AQ96A25 262 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 HCFC1R1Q9NWW0 138 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 HELTA6NFD8 242 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 IL5P05113 134 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 CD46P15529 392 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 FPR3P25089 353 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 G6PCP35575 357 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 PSMB10P40306 273 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 SLC6A11P48066 632 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 P2RX3P56373 397 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 SLC35A1P78382 337 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 EXOSC2Q13868 293 aaKnown RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM217Q8N7C4 229 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 LKAAEAR1Q8TD35 194 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 MS4A10Q96PG2 267 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 SELENOIQ9C0D9 397 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 EIF1BO60739 113 aaKnown RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 T-ENOLP0DO92 83 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 ARSAP15289 507 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 CPEP16870 476 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 PMCHP20382 165 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 APEX1P27695 318 aaKnown RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 FCGR2CP31995 323 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 GZMKP49863 264 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 RPS25P62851 125 aaKnown RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 TOMM34Q15785 309 aaPredicted RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 PIP5KL1Q5T9C9 394 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 STUMQ69YW2 141 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 PRR27Q6MZM9 219 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 STPG2Q8N412 459 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 CMBLQ96DG6 245 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 C20orf24Q9BUV8 137 aa6.6□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF256Q9Y2P7 627 aaPredicted RBP6.6□□□□□ -1.35
COLCA1-205ENST00000620864 SH2D7A6NKC9 451 aaPredicted RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 TOX3O15405 576 aaPredicted RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 MT-ATP6P00846 226 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 LIPCP11150 499 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 F3P13726 295 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 MPGP29372 298 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 AHRP35869 848 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 RABIFP47224 123 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CCL11P51671 97 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 EMC4Q5J8M3 183 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 C9orf50Q5SZB4 431 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CYB561A3Q8NBI2 242 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 PDLIM5Q96HC4 596 aaKnown RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 C2orf50Q96LR7 162 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 PEBP4Q96S96 227 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 COL3A1P02461 1466 aaPredicted RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 A0A087X0M5 115 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 A0A1B0GX30 115 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 A0A1W2PPC1 479 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 FUCA1P04066 466 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 SLC19A1P41440 591 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 MEOX1P50221 254 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 DLK1P80370 383 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM240Q5SV17 173 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 TSEN54Q7Z6J9 526 aaKnown RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF761Q86XN6 746 aaPredicted RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 MFSD9Q8NBP5 474 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 FAM174AQ8TBP5 190 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 ANAPC16Q96DE5 110 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 PHF7Q9BWX1 381 aaPredicted RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 OBP2BQ9NPH6 170 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 TAS2R5Q9NYW4 299 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 NME2P1O60361 137 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 GJA4P35212 333 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 MMP15P51511 669 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 LGALS4P56470 323 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 HHEXQ03014 270 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 SLC10A2Q12908 348 aaPredicted RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM184AQ6ZMB5 413 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 ACVR1CQ8NER5 493 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 OR4C16Q8NGL9 310 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 UCN3Q969E3 161 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 SLCO1B1Q9Y6L6 691 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CDC14CA4D256 554 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CSO75390 466 aaKnown RBP6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CBR3O75828 277 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CD99P14209 185 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 CRISP2P16562 243 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 OR1D4P47884 311 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 SLC35G1Q2M3R5 365 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 PM20D1Q6GTS8 502 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 THNSL2Q86YJ6 484 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 NMES1Q9C002 83 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 A4GALTQ9NPC4 353 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 APC2O95996 2303 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 A0A1B0GV72 72 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 LRRC3CA6NJW4 275 aa6.59□□□□□ -1.35
COLCA1-205ENST00000620864 A6NJY4 79 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms