RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 OR51L1Q8NGJ5 315 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 HSD17B8Q92506 261 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 RFKQ969G6 155 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 NMD3Q96D46 503 aaKnown RBP12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF837Q96EG3 531 aaPredicted RBP12.94□□□□□ -0.34
UBXN1-218ENST00000616865 Q96MT0 163 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 MUS81Q96NY9 551 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 FOXN4Q96NZ1 517 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 RACGAP1Q9H0H5 632 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 MOKQ9UQ07 419 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 POLR1DQ9Y2S0 133 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 A0A096LPE4 126 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 IGLV1-36A0A0B4J1U3 117 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 A0A1W2PPZ6 126 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 PRODHO43272 600 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 CLIC3O95833 236 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 IFNA2P01563 188 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 OR8G3PP0DMU2 310 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 CLUP10909 449 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 B4GALT1P15291 398 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF823P16415 610 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 COX5AP20674 150 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 CDAP32320 146 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 CAPZA2P47755 286 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 BLVRAP53004 296 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 FOXG1P55316 489 aaPredicted RBP12.93□□□□□ -0.34
UBXN1-218ENST00000616865 UBE2NP61088 152 aaKnown RBP12.93□□□□□ -0.34
UBXN1-218ENST00000616865 SNRPGP62308 76 aaKnown RBP12.93□□□□□ -0.34
UBXN1-218ENST00000616865 BSPH1Q075Z2 132 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 SLC35D3Q5M8T2 416 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 MEDAGQ5VYS4 303 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 ZBTB46Q86UZ6 589 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 C1orf162Q8NEQ5 155 aaPredicted RBP12.93□□□□□ -0.34
UBXN1-218ENST00000616865 OR1K1Q8NGR3 316 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 TFAP2CQ92754 450 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 PTP4A1Q93096 173 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 UBE2FQ969M7 185 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 DDOQ99489 341 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 TRAF4Q9BUZ4 470 aaPredicted RBP12.93□□□□□ -0.34
UBXN1-218ENST00000616865 NMNAT2Q9BZQ4 307 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 TMEM38BQ9NVV0 291 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 RAB26Q9ULW5 256 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
UBXN1-218ENST00000616865 STAB1Q9NY15 2570 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 E9PQ18 207 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 DCTN6O00399 190 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 NDUFS7O75251 213 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 GLCEO94923 617 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 MSR1P21757 451 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 CDH11P55287 796 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 MRPS34P82930 218 aaKnown RBP12.92□□□□□ -0.34
UBXN1-218ENST00000616865 NXNL2Q5VZ03 156 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 MEPCEQ7L2J0 689 aaKnown RBP12.92□□□□□ -0.34
UBXN1-218ENST00000616865 THAP5Q7Z6K1 395 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 ENTHD1Q8IYW4 607 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 SLC22A24Q8N4F4 322 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 BBS1Q8NFJ9 593 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 MUCL1Q96DR8 90 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
UBXN1-218ENST00000616865 CDADC1Q9BWV3 514 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 HCAR1Q9BXC0 346 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 NELFAQ9H3P2 528 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 SIAEQ9HAT2 523 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 BARX1Q9HBU1 254 aaPredicted RBP12.92□□□□□ -0.34
UBXN1-218ENST00000616865 GDF2Q9UK05 429 aaPredicted RBP12.92□□□□□ -0.34
UBXN1-218ENST00000616865 UGT2A1Q9Y4X1 527 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 HSPE1-MOB4S4R3N1 261 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 ABCA1O95477 2261 aa12.92□□□□□ -0.34
UBXN1-218ENST00000616865 DPRXA6NFQ7 191 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 TVP23AA6NH52 213 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 SLC22A31A6NKX4 558 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 GNAO1P09471 354 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 CD79AP11912 226 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 GSTT1P30711 240 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 ATP6V1E1P36543 226 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 EFNB1P98172 346 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 TEKQ02763 1124 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 HSF2Q03933 536 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 DBPQ10586 325 aaPredicted RBP12.91□□□□□ -0.34
UBXN1-218ENST00000616865 MAD2L1BPQ15013 274 aaPredicted RBP12.91□□□□□ -0.34
UBXN1-218ENST00000616865 GABRA6Q16445 453 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 OCLNQ16625 522 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 HIKESHIQ53FT3 197 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 KRT80Q6KB66 452 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 BCDIN3DQ7Z5W3 292 aaKnown RBP12.91□□□□□ -0.34
UBXN1-218ENST00000616865 DTX2Q86UW9 622 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 CCDC36Q8IYA8 594 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 LRRC18Q8N456 261 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 C17orf78Q8N4C9 275 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 RHOXF1Q8NHV9 184 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 HTRA1Q92743 480 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 BCL2L2Q92843 193 aaPredicted RBP12.91□□□□□ -0.34
UBXN1-218ENST00000616865 ZMYND19Q96E35 227 aaPredicted RBP12.91□□□□□ -0.34
UBXN1-218ENST00000616865 CNBD2Q96M20 576 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF582Q96NG8 517 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms