RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ZNF14P17017 642 aaPredicted RBP11.8□□□□□ -0.52
FOXN3-219ENST00000615335 GDNFP39905 211 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 CASP6P55212 293 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 FOXL2P58012 376 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 MELKQ14680 651 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 PLBD1Q6P4A8 553 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 IL20RBQ6UXL0 311 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 B3GLCTQ6Y288 498 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 ACBD7Q8N6N7 88 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 DOK4Q8TEW6 326 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 AHCTF1Q8WYP5 2266 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 TGIF2Q9GZN2 237 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 PLEKHA1Q9HB21 404 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 TP53TG5Q9Y2B4 290 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 MMACHCQ9Y4U1 282 aa11.8□□□□□ -0.52
FOXN3-219ENST00000615335 IGLV3-12A0A075B6K2 115 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 BLOC1S5-TXNDC5H3BN57 136 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 J3QRE1 110 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 MT-ND4LP03901 98 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 CD81P60033 236 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 NSDHLQ15738 373 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ARHGAP11BQ3KRB8 267 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 EIPR1Q53HC9 387 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 SFRP4Q6FHJ7 346 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ZCCHC12Q6PEW1 402 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 SMARCD3Q6STE5 483 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 NHLRC1Q6VVB1 395 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 OR52L1Q8NGH7 329 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 BRIX1Q8TDN6 353 aaKnown RBP11.79□□□□□ -0.52
FOXN3-219ENST00000615335 MEGF10Q96KG7 1140 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ZFP3Q96NJ6 502 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 DGAT2Q96PD7 388 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 WNT5BQ9H1J7 359 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 TLNRD1Q9H1K6 362 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 OR52D1Q9H346 318 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 HRASLSQ9HDD0 168 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 DUSP22Q9NRW4 184 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 FOXJ2Q9P0K8 574 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 DCHS1Q96JQ0 3298 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 PTPRBP23467 1997 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 KANTRA0A1W2PQU2 76 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 DCDC2BA2VCK2 349 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 PSMD9O00233 223 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ONECUT2O95948 504 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 SLC2A1P11166 492 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ZNF35P13682 527 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 BPIFB3P59826 476 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 PPA1Q15181 289 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ZNF239Q16600 458 aaKnown RBP11.79□□□□□ -0.52
FOXN3-219ENST00000615335 NIPAL3Q6P499 406 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 MED25Q71SY5 747 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 MEPCEQ7L2J0 689 aaKnown RBP11.79□□□□□ -0.52
FOXN3-219ENST00000615335 OR2W3Q7Z3T1 314 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 RANBP3LQ86VV4 465 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-219ENST00000615335 NR2C2APQ86WQ0 139 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 TSLPQ969D9 159 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 SPSB2Q99619 263 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 ALG8Q9BVK2 526 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 DPH1Q9BZG8 443 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 MED20Q9H944 212 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 DLL3Q9NYJ7 618 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 CLDN16Q9Y5I7 305 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 NUP210LQ5VU65 1888 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 SPTBN2O15020 2390 aa11.79□□□□□ -0.52
FOXN3-219ENST00000615335 A0A1B0GVC2 190 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 A6NIN4 97 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 RFPL4AA6NLU0 287 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 C9J4A7 227 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 RFPL4AL1F8VTS6 287 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 DVL2O14641 736 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 PPIHO43447 177 aaKnown RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 BDKRB2P30411 391 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 ZNF136P52737 540 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 ART1P52961 327 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 IGLV3-21P80748 117 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 IL10RAQ13651 578 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 DUSP5Q16690 384 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 TRMT12Q53H54 448 aaKnown RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 RNASE12Q5GAN4 147 aaKnown RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 NKAPLQ5M9Q1 402 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 C6orf15Q6UXA7 325 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 SLC29A4Q7RTT9 530 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 TMEM99Q8N816 258 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 OR1S2Q8NGQ3 325 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 OR1J4Q8NGS1 313 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 TBX5Q99593 518 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 PNO1Q9NRX1 252 aaKnown RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 PADI1Q9ULC6 663 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 CLEC4AQ9UMR7 237 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 OR10H1Q9Y4A9 318 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 SIRT4Q9Y6E7 314 aaPredicted RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 SDK2Q58EX2 2172 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 DAPL1A0PJW8 107 aa11.78□□□□□ -0.52
FOXN3-219ENST00000615335 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
FOXN3-219ENST00000615335 IDSB3KWA1 339 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms