RNA–Protein interactions for RNA: ENST00000613670.4

LIG1-221, Transcript of DNA ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LIG1, Length 3,949 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-221ENST00000613670 TDGQ13569 410 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 OR2F1Q13607 317 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 PAN3Q58A45 887 aaKnown RBP11.4□□□□□ -0.59
LIG1-221ENST00000613670 ABHD12BQ7Z5M8 362 aaPredicted RBP11.4□□□□□ -0.59
LIG1-221ENST00000613670 CBLN2Q8IUK8 224 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 ZNF679Q8IYX0 411 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 C19orf47Q8N9M1 422 aaKnown RBP11.4□□□□□ -0.59
LIG1-221ENST00000613670 LRFN5Q96NI6 719 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 EMC6Q9BV81 110 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 BANF2Q9H503 90 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 KLRF1Q9NZS2 232 aa11.4□□□□□ -0.59
LIG1-221ENST00000613670 OR5K4A6NMS3 321 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 SNAPINO95295 136 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 IFNA21P01568 189 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 BDKRB2P30411 391 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 HRH1P35367 487 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 AKR1C3P42330 323 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 PPT1P50897 306 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 FLI1Q01543 452 aaPredicted RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 PDZK1IP1Q13113 114 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 CD226Q15762 336 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 TMEM225Q6GV28 225 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 C11orf87Q6NUJ2 197 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 SLC25A24Q6NUK1 477 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 RAB11FIP2Q7L804 512 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 ZNF595Q8IYB9 648 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 OR51A2Q8NGJ7 313 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 MARCH1Q8TCQ1 289 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 ELP5Q8TE02 316 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 TIMP4Q99727 224 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 VSX1Q9NZR4 365 aaPredicted RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 C14orf166Q9Y224 244 aaKnown RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 PLXNA4Q9HCM2 1894 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 CYR61O00622 381 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 F12P00748 615 aaPredicted RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 ALOX5APP20292 161 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 CRABP1P29762 137 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 CHRFAM7AQ494W8 412 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 TMEM244Q5VVB8 128 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 PNLDC1Q8NA58 520 aaKnown RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 ASB17Q8WXJ9 295 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 ANKRD9Q96BM1 317 aaPredicted RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 OR52A1Q9UKL2 312 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 AQP8O94778 261 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 MPZL1O95297 269 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 SNRNP70P08621 437 aaKnown RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 GNB3P16520 340 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 FZD5Q13467 585 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 PPP1R1AQ13522 171 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 SERTAD2Q14140 314 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 GPR119Q8TDV5 335 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 RGP1Q92546 391 aaPredicted RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 TAAR8Q969N4 342 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 AMELYQ99218 206 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
LIG1-221ENST00000613670 ARHGEF17Q96PE2 2063 aaPredicted RBP11.39□□□□□ -0.59
LIG1-221ENST00000613670 OIP5O43482 229 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 SGCEO43556 437 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 RAB6AP20340 208 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 IL10RAQ13651 578 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 SGCAQ16586 387 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 ANGPTL5Q86XS5 388 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 ESX1Q8N693 406 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 PMM1Q92871 262 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 TSPAN32Q96QS1 320 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 CRB3Q9BUF7 120 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 RGCCQ9H4X1 137 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 RHBDD3Q9Y3P4 386 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 TXNL1O43396 289 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 BCL2L11O43521 198 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 CTSBP07858 339 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 CYCSP99999 105 aaKnown RBP11.38□□□□□ -0.59
LIG1-221ENST00000613670 UBXN2BQ14CS0 331 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 PEA15Q15121 130 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 OTOSQ8NHW6 89 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 RNF141Q8WVD5 230 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 MAFIPQ8WZ33 124 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 TOMM40LQ969M1 308 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 CDC6Q99741 560 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 NPAS1Q99742 590 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 TMED7-TICAM2A0A0A6YYA0 188 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 A0A0A6YYH2 397 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 A6NJ64 397 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 ZNF726A6NNF4 738 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 C1orf196B1AJZ1 125 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
LIG1-221ENST00000613670 GLI4P10075 376 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 ABCA11PQ4W5N1 156 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 OR6K3Q8NGY3 331 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 TSLPQ969D9 159 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 SCGB3A2Q96PL1 93 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 OR8B4Q96RC9 309 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 PLA2G2FQ9BZM2 168 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 BCL2L14Q9BZR8 327 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 PRR13Q9NZ81 148 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 TMED7Q9Y3B3 224 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 FAM96BQ9Y3D0 163 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 DOCK9Q9BZ29 2069 aa11.38□□□□□ -0.59
LIG1-221ENST00000613670 TRAV36DV7A0A075B6V5 113 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms