RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 RAF1P04049 648 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 SPARCP09486 303 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 COX5BP10606 129 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 CCNOP22674 350 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 PEX2P28328 305 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 CALCRP30988 508 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 GGT2P36268 569 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 HTR5AP47898 357 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 ENTPD1P49961 510 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 SNTB2Q13425 540 aaKnown RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 APOFQ13790 326 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 KEAP1Q14145 624 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 LINC01590Q5TEZ4 76 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 NXNL2Q5VZ03 156 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 OTPQ5XKR4 325 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 LPCAT4Q643R3 524 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 ZNF544Q6NX49 715 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 PAMR1Q6UXH9 720 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 SHFQ7M4L6 423 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 CDH24Q86UP0 819 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 ERI1Q8IV48 349 aaKnown RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 GID4Q8IVV7 300 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 ZNF511Q8NB15 262 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 NUP37Q8NFH4 326 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 LILRB1Q8NHL6 650 aaPredicted RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 SMAP2Q8WU79 429 aaPredicted RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 TRUB1Q8WWH5 349 aaKnown RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 HRASLS5Q96KN8 279 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 INTS14Q96SY0 518 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 DHRS9Q9BPW9 319 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 MRPL22Q9NWU5 206 aaKnown RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 EIF3KQ9UBQ5 218 aaKnown RBP11.49□□□□□ -0.57
MDC1-209ENST00000613547 CYB5R1Q9UHQ9 305 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 GMPPBQ9Y5P6 360 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 LHFPL6Q9Y693 200 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 NAV2Q8IVL1 2488 aa11.49□□□□□ -0.57
MDC1-209ENST00000613547 ABCA4P78363 2273 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 C5orf49A4QMS7 147 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 SLC22A31A6NKX4 558 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 M0R129 80 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 RER1O15258 196 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 BMP4P12644 408 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 ZNF35P13682 527 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 NR4A1P22736 598 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 DNASE1P24855 282 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 RAD52P43351 418 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 FABP6P51161 128 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 HIST1H3AP68431 136 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 EFNB1P98172 346 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 ECH1Q13011 328 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 TEX30Q5JUR7 227 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 OGFRL1Q5TC84 451 aaPredicted RBP11.48□□□□□ -0.57
MDC1-209ENST00000613547 HIST2H3PS2Q5TEC6 136 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 AGAP6Q5VW22 663 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 SLC18B1Q6NT16 456 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 CORO6Q6QEF8 472 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 HIST2H3AQ71DI3 136 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
MDC1-209ENST00000613547 FBXL14Q8N1E6 418 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 CPEB3Q8NE35 698 aaKnown RBP11.48□□□□□ -0.57
MDC1-209ENST00000613547 BBS1Q8NFJ9 593 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 OR6N2Q8NGY6 317 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 OR1F12Q8NHA8 337 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 ZNRF4Q8WWF5 429 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 IPCEF1Q8WWN9 437 aaPredicted RBP11.48□□□□□ -0.57
MDC1-209ENST00000613547 NEUROG1Q92886 237 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 RFKQ969G6 155 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 PIGTQ969N2 578 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 ZMYND19Q96E35 227 aaPredicted RBP11.48□□□□□ -0.57
MDC1-209ENST00000613547 POM121L2Q96KW2 1035 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 MBOAT4Q96T53 435 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 PITX2Q99697 317 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 CCL19Q99731 98 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 ZNF442Q9H7R0 627 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 MARCH7Q9H992 704 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 CA10Q9NS85 328 aa11.48□□□□□ -0.57
MDC1-209ENST00000613547 GDF2Q9UK05 429 aaPredicted RBP11.48□□□□□ -0.57
MDC1-209ENST00000613547 LOC100130705A0A1B0GUX0 176 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 E7EQL1 145 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 ZNF593O00488 134 aaPredicted RBP11.47□□□□□ -0.57
MDC1-209ENST00000613547 MPZL2O60487 215 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 CCL2P13500 99 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 SLC2A5P22732 501 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 PCSK6P29122 969 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 APOBEC3AP31941 199 aaPredicted RBP11.47□□□□□ -0.57
MDC1-209ENST00000613547 HGFACQ04756 655 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 PCK2Q16822 640 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 TMEM154Q6P9G4 183 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 LYPD4Q6UWN0 246 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 B3GLCTQ6Y288 498 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 MEPCEQ7L2J0 689 aaKnown RBP11.47□□□□□ -0.57
MDC1-209ENST00000613547 DCXRQ7Z4W1 244 aa11.47□□□□□ -0.57
MDC1-209ENST00000613547 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms