RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 NTN4Q9HB63 628 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 SAR1AQ9NR31 198 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 POLE4Q9NR33 117 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 MMP26Q9NRE1 261 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 MAN2C1Q9NTJ4 1040 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 DDX28Q9NUL7 540 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 TMEM106BQ9NUM4 274 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 PURGQ9UJV8 347 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 NDRG4Q9ULP0 352 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 STARD10Q9Y365 291 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 PPIAL4AQ9Y536 164 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 TANC2Q9HCD6 1990 aa11.3□□□□□ -0.6
POLR2J3-219ENST00000608621 PPIAL4EA0A075B759 164 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 A0A087WUU8 490 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 PPIAL4CA0A0B4J2A2 164 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 PPIAL4DF5H284 164 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 TRAPPC2LH3BP13 241 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 FFAR1O14842 300 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 ABHD16AO95870 558 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 PPIAL4FP0DN26 164 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 COX5BP10606 129 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 GSTM3P21266 225 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 UBA52P62987 128 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 TRAM2Q15035 370 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 MAPRE2Q15555 327 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 AWAT1Q58HT5 328 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 TBPL2Q6SJ96 375 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 Q6ZR03 302 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 VTCN1Q7Z7D3 282 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 RNF113BQ8IZP6 322 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 DEFB108BQ8NET1 73 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 OR2Z1Q8NG97 314 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 OR13C2Q8NGS9 318 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 CMBLQ96DG6 245 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 SAMD8Q96LT4 415 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 WACQ9BTA9 647 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 PATZ1Q9HBE1 687 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 MRGBPQ9NV56 204 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 GRHPRQ9UBQ7 328 aa11.29□□□□□ -0.6
POLR2J3-219ENST00000608621 WIPF1O43516 503 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 SGCEO43556 437 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 DOK2O60496 412 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 IFNW1P05000 195 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 KITLGP21583 273 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 TUBG1P23258 451 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 TNFSF4P23510 183 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 RPL4P36578 427 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 HTR5AP47898 357 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 SLC6A9P48067 706 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 SLC9A3P48764 834 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 SCRN3Q0VDG4 424 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 OTPQ5XKR4 325 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 C1orf94Q6P1W5 598 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 ZNF730Q6ZMV8 503 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 LRRC28Q86X40 367 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 OFCC1Q8IZS5 231 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 KLHL36Q8N4N3 616 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 ZNF283Q8N7M2 679 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 SIGLECL1Q8N7X8 197 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 NPEPL1Q8NDH3 523 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 ITLN1Q8WWA0 313 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 ACOT11Q8WXI4 607 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 POP5Q969H6 163 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 HAVCR1Q96D42 359 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 Q96M85 177 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 VIPAS39Q9H9C1 493 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 IL19Q9UHD0 177 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 ADAM18Q9Y3Q7 739 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 AUP1Q9Y679 476 aa11.28□□□□□ -0.6
POLR2J3-219ENST00000608621 XKRYO14609 159 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 CDC42EP2O14613 210 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 ZNF682O95780 498 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 CD14P08571 375 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 ZNF26P17031 533 aaPredicted RBP11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 GPR4P46093 362 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 ZNF154Q13106 437 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 ZMYND11Q15326 602 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 ZBED5Q49AG3 693 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 MESTQ5EB52 335 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 CGB2Q6NT52 195 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 RBMS3Q6XE24 437 aaKnown RBP11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 TMPRSS11FQ6ZWK6 438 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 MBOAT2Q6ZWT7 520 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 RRM2BQ7LG56 351 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 SLC15A3Q8IY34 581 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 SPICQ8N5J4 248 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 SLC7A6Q92536 515 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 PTP4A1Q93096 173 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 FGFR1OP2Q9NVK5 253 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 PLEK2Q9NYT0 353 aa11.27□□□□□ -0.61
POLR2J3-219ENST00000608621 ZNF69Q9UC07 566 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms