RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 CADP27708 2225 aa16.76■□□□□ 0.27
UPF1-209ENST00000600310 HS3ST1O14792 307 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 RER1O15258 196 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 SGCEO43556 437 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 COX5BP10606 129 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 STOMP27105 288 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 APEX1P27695 318 aaKnown RBP16.75■□□□□ 0.27
UPF1-209ENST00000600310 GSTT1P30711 240 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 ENTPD1P49961 510 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 CDC42P60953 191 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 HGFACQ04756 655 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 RIPK1Q13546 671 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 PCK2Q16822 640 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 CCDC92Q53HC0 331 aaPredicted RBP16.75■□□□□ 0.27
UPF1-209ENST00000600310 TEX30Q5JUR7 227 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 AADACL4Q5VUY2 407 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 NXNL2Q5VZ03 156 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 SLC18B1Q6NT16 456 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 ZNF774Q6NX45 483 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 CORO6Q6QEF8 472 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 VASH1Q7L8A9 365 aaPredicted RBP16.75■□□□□ 0.27
UPF1-209ENST00000600310 GJC3Q8NFK1 279 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 OR4F15Q8NGB8 312 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 OR1J2Q8NGS2 313 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 TRUB1Q8WWH5 349 aaKnown RBP16.75■□□□□ 0.27
UPF1-209ENST00000600310 POM121L2Q96KW2 1035 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 LURAP1Q96LR2 239 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 WDR76Q9H967 626 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 FAM118AQ9NWS6 357 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 PLEK2Q9NYT0 353 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 CISD1Q9NZ45 108 aaKnown RBP16.75■□□□□ 0.27
UPF1-209ENST00000600310 POU2F3Q9UKI9 436 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 ATP23Q9Y6H3 246 aa16.75■□□□□ 0.27
UPF1-209ENST00000600310 CREBBPQ92793 2442 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 CCDC182A6NF36 153 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 E7EQL1 145 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 SLC16A6O15403 523 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 DOK2O60496 412 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 TMCC2O75069 709 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 APLNRP35414 380 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 CDH11P55287 796 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 APOFQ13790 326 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 TBC1D28Q2M2D7 210 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 B3GLCTQ6Y288 498 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 LINC00346Q8IVM7 164 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 TIGD4Q8IY51 512 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 OR2AJ1Q8NGZ0 328 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 FAM81AQ8TBF8 368 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 ZMYND19Q96E35 227 aaPredicted RBP16.74■□□□□ 0.27
UPF1-209ENST00000600310 INTS14Q96SY0 518 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 TEAD3Q99594 435 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 UBTD1Q9HAC8 227 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 CDH20Q9HBT6 801 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 IMPAD1Q9NX62 359 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 H2AFY2Q9P0M6 372 aaPredicted RBP16.74■□□□□ 0.27
UPF1-209ENST00000600310 GDF2Q9UK05 429 aaPredicted RBP16.74■□□□□ 0.27
UPF1-209ENST00000600310 GMPPBQ9Y5P6 360 aa16.74■□□□□ 0.27
UPF1-209ENST00000600310 LOC100509620A0A075B734 347 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 LOC100130705A0A1B0GUX0 176 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 ZNF593O00488 134 aaPredicted RBP16.73■□□□□ 0.27
UPF1-209ENST00000600310 SYNGR3O43761 229 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 PSKH1P11801 424 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 CCL2P13500 99 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 GDI2P50395 445 aaKnown RBP16.73■□□□□ 0.27
UPF1-209ENST00000600310 RPS7P62081 194 aaKnown RBP16.73■□□□□ 0.27
UPF1-209ENST00000600310 RAB35Q15286 201 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 CFAP77Q6ZQR2 320 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 BCDIN3DQ7Z5W3 292 aaKnown RBP16.73■□□□□ 0.27
UPF1-209ENST00000600310 ZNF611Q8N823 705 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 NUP37Q8NFH4 326 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 NRGNQ92686 78 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 UBE2FQ969M7 185 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 FBXW5Q969U6 566 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 ATPIF1Q9UII2 106 aa16.73■□□□□ 0.27
UPF1-209ENST00000600310 OR6C6A6NF89 314 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 SPARCP09486 303 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 NR4A1P22736 598 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 RPS27P42677 84 aaKnown RBP16.72■□□□□ 0.27
UPF1-209ENST00000600310 HTR5AP47898 357 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 NKX6-1P78426 367 aaPredicted RBP16.72■□□□□ 0.27
UPF1-209ENST00000600310 KEAP1Q14145 624 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 ELFN2Q5R3F8 820 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 LCN1P1Q5VSP4 162 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 C20orf204Q6ZNR8 217 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 MEPCEQ7L2J0 689 aaKnown RBP16.72■□□□□ 0.27
UPF1-209ENST00000600310 ERI1Q8IV48 349 aaKnown RBP16.72■□□□□ 0.27
UPF1-209ENST00000600310 GID4Q8IVV7 300 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 PAQR4Q8N4S7 273 aaPredicted RBP16.72■□□□□ 0.27
UPF1-209ENST00000600310 ZNF555Q8NEP9 628 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 OR1F12Q8NHA8 337 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 NRG4Q8WWG1 115 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 MAP6Q96JE9 813 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 DHRS9Q9BPW9 319 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 HDHD2Q9H0R4 259 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 VCXQ9H320 206 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 LIME1Q9H400 295 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 PNRC2Q9NPJ4 139 aaKnown RBP16.72■□□□□ 0.27
UPF1-209ENST00000600310 RRP15Q9Y3B9 282 aaKnown RBP16.72■□□□□ 0.27
UPF1-209ENST00000600310 SPEF1Q9Y4P9 236 aa16.72■□□□□ 0.27
UPF1-209ENST00000600310 C5orf49A4QMS7 147 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms