RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 NPIPB13A6NJU9 1138 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 FAM220BPB1ANY3 271 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 NPIPB4C9JG80 1138 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 ACOT8O14734 319 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 NGFP01138 241 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 PTHP01270 115 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 EGR1P18146 543 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 MS4A2Q01362 244 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 SLC34A1Q06495 639 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 HFEQ30201 348 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 FAM209AQ5JX71 171 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 LCN8Q6JVE9 175 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 IGFN1Q86VF2 1251 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 ZDHHC22Q8N966 263 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 ABHD4Q8TB40 342 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 KLF14Q8TD94 323 aaPredicted RBP12.43□□□□□ -0.42
IRF3-223ENST00000599223 LIPHQ8WWY8 451 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 C22orf15Q8WYQ4 148 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 CCL17Q92583 94 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 ELMOD3Q96FG2 381 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 GAL3ST1Q99999 423 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 OR2H1Q9GZK4 316 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 SMURF2Q9HAU4 748 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 CCNB1IP1Q9NPC3 277 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 EGFL7Q9UHF1 273 aa12.43□□□□□ -0.42
IRF3-223ENST00000599223 ARPC2O15144 300 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 SPRY1O43609 319 aaPredicted RBP12.42□□□□□ -0.42
IRF3-223ENST00000599223 IGF2P01344 180 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 HOXB6P17509 224 aaKnown RBP12.42□□□□□ -0.42
IRF3-223ENST00000599223 LAP3P28838 519 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 ERFP50548 548 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 LCN2P80188 198 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 TEKQ02763 1124 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 SCGB2A2Q13296 93 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 FHL1Q13642 323 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 SGCAQ16586 387 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 DCAF12L2Q5VW00 463 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 MBNL2Q5VZF2 373 aaKnown RBP12.42□□□□□ -0.42
IRF3-223ENST00000599223 GLYATQ6IB77 296 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 CYP2R1Q6VVX0 501 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 HDDC2Q7Z4H3 204 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 MICU2Q8IYU8 434 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 LRRC75AQ8NAA5 344 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 RASSF5Q8WWW0 418 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 GCDHQ92947 438 aaPredicted RBP12.42□□□□□ -0.42
IRF3-223ENST00000599223 TXNIPQ9H3M7 391 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 POFUT1Q9H488 388 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 MSL2Q9HCI7 577 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 HIF3AQ9Y2N7 669 aa12.42□□□□□ -0.42
IRF3-223ENST00000599223 ISPDA4D126 451 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 TRIM77I1YAP6 450 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 J3QLI3 93 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 ICMTO60725 284 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 IGHMP01871 453 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 MT-ND5P03915 603 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 SCG5P05408 212 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 ANPEPP15144 967 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 ZFP36P26651 326 aaKnown RBP12.41□□□□□ -0.42
IRF3-223ENST00000599223 GDI2P50395 445 aaKnown RBP12.41□□□□□ -0.42
IRF3-223ENST00000599223 PPP1CBP62140 327 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 ENDOGQ14249 297 aaKnown RBP12.41□□□□□ -0.42
IRF3-223ENST00000599223 ZNF718Q3SXZ3 478 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 ALG10Q5BKT4 473 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 FAM27BQ5VT28 67 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 ZNF774Q6NX45 483 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 FOXL2NBQ6ZUU3 175 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 FAM162AQ96A26 154 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 ZNF583Q96ND8 569 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 RBM4Q9BWF3 364 aaKnown RBP12.41□□□□□ -0.42
IRF3-223ENST00000599223 YY1AP1Q9H869 796 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 MAN2C1Q9NTJ4 1040 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 UBAP1Q9NZ09 502 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 GMPR2Q9P2T1 348 aaKnown RBP12.41□□□□□ -0.42
IRF3-223ENST00000599223 BAG5Q9UL15 447 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 A4GNTQ9UNA3 340 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 MED31Q9Y3C7 131 aa12.41□□□□□ -0.42
IRF3-223ENST00000599223 TRAV27A0A087WT01 109 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 DHRS12A0PJE2 317 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 H7C1C5 153 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 PRSS23O95084 383 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 ADH4P08319 380 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 FCGR1AP12314 374 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 GCH1P30793 250 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 SEC61A1P61619 476 aaKnown RBP12.4□□□□□ -0.42
IRF3-223ENST00000599223 LCN6P62502 163 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 LRRC23Q53EV4 343 aaPredicted RBP12.4□□□□□ -0.42
IRF3-223ENST00000599223 CYBRD1Q53TN4 286 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 AWAT1Q58HT5 328 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 DEFB108BQ8NET1 73 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 RAB1CQ92928 201 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 DVL3Q92997 716 aaPredicted RBP12.4□□□□□ -0.42
IRF3-223ENST00000599223 ALG12Q9BV10 488 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 SUCNR1Q9BXA5 334 aa12.4□□□□□ -0.42
IRF3-223ENST00000599223 POLR2J2Q9GZM3 115 aaKnown RBP12.4□□□□□ -0.42
IRF3-223ENST00000599223 POLR2J3Q9H1A7 115 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms