RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 SERPINA5P05154 406 aa13□□□□□ -0.33
LIG1-214ENST00000597146 DRD4P21917 467 aa13□□□□□ -0.33
LIG1-214ENST00000597146 PRDX6P30041 224 aa13□□□□□ -0.33
LIG1-214ENST00000597146 GSK3BP49841 420 aa13□□□□□ -0.33
LIG1-214ENST00000597146 ZNF81P51508 661 aa13□□□□□ -0.33
LIG1-214ENST00000597146 PROK1P58294 105 aa13□□□□□ -0.33
LIG1-214ENST00000597146 CLRN1P58418 232 aa13□□□□□ -0.33
LIG1-214ENST00000597146 PAX8Q06710 450 aa13□□□□□ -0.33
LIG1-214ENST00000597146 IFI44LQ53G44 452 aa13□□□□□ -0.33
LIG1-214ENST00000597146 HACD2Q6Y1H2 254 aa13□□□□□ -0.33
LIG1-214ENST00000597146 SLC30A7Q8NEW0 376 aa13□□□□□ -0.33
LIG1-214ENST00000597146 ZNF519Q8TB69 540 aa13□□□□□ -0.33
LIG1-214ENST00000597146 TMEM255BQ8WV15 326 aa13□□□□□ -0.33
LIG1-214ENST00000597146 GEMIN6Q8WXD5 167 aaKnown RBP13□□□□□ -0.33
LIG1-214ENST00000597146 DCLRE1CQ96SD1 692 aaKnown RBP13□□□□□ -0.33
LIG1-214ENST00000597146 TAS2R5Q9NYW4 299 aa13□□□□□ -0.33
LIG1-214ENST00000597146 EGFL7Q9UHF1 273 aa13□□□□□ -0.33
LIG1-214ENST00000597146 RPS6KA6Q9UK32 745 aa13□□□□□ -0.33
LIG1-214ENST00000597146 ARL2BPQ9Y2Y0 163 aa13□□□□□ -0.33
LIG1-214ENST00000597146 NPTNQ9Y639 398 aa13□□□□□ -0.33
LIG1-214ENST00000597146 A8MXK9 166 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 NME4O00746 187 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 FZD7O75084 574 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 LYPD3O95274 346 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 SERPINA1P01009 418 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 SBK2P0C263 348 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 SLC6A9P48067 706 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 CRYBA2P53672 197 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 SLC3A1Q07837 685 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 TRAM2Q15035 370 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 PDCD1Q15116 288 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 C2orf68Q2NKX9 166 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 FAM209AQ5JX71 171 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 SKA3Q8IX90 412 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 OR6X1Q8NH79 312 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 PFN4Q8NHR9 129 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 LINC01006Q8NI28 216 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 C11orf40Q8WZ69 217 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 UPRTQ96BW1 309 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 SLC25A44Q96H78 314 aaPredicted RBP12.99□□□□□ -0.33
LIG1-214ENST00000597146 DIRC2Q96SL1 478 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 PRSS27Q9BQR3 290 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 DENND2DQ9H6A0 471 aaPredicted RBP12.99□□□□□ -0.33
LIG1-214ENST00000597146 RNF121Q9H920 327 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 PATZ1Q9HBE1 687 aaKnown RBP12.99□□□□□ -0.33
LIG1-214ENST00000597146 CDH20Q9HBT6 801 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 SPAG4Q9NPE6 437 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 INIPQ9NRY2 104 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 GLTPQ9NZD2 209 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 RHCGQ9UBD6 479 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 OR5V1Q9UGF6 321 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 FBXL3Q9UKT7 428 aa12.99□□□□□ -0.33
LIG1-214ENST00000597146 HTR3EA5X5Y0 456 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 ZSCAN5BA6NJL1 495 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 H0YL77 283 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 DCTN3O75935 186 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 FARS2O95363 451 aaKnown RBP12.98□□□□□ -0.33
LIG1-214ENST00000597146 MT-ND5P03915 603 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 F13BP05160 661 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 IFI30P13284 250 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 NCK1P16333 377 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 GUCA1AP43080 201 aaPredicted RBP12.98□□□□□ -0.33
LIG1-214ENST00000597146 ZNF84P51523 738 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 MELKQ14680 651 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 KRT72Q14CN4 511 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 LAPTM4AQ15012 233 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 GLYATQ6IB77 296 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 C11orf87Q6NUJ2 197 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 ZNF730Q6ZMV8 503 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 REC114Q7Z4M0 266 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 VTCN1Q7Z7D3 282 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 OR10S1Q8NGN2 331 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 PRRC1Q96M27 445 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 SLC30A2Q9BRI3 323 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 MYLK2Q9H1R3 596 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 KCNN2Q9H2S1 579 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 PRDM13Q9H4Q3 707 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
LIG1-214ENST00000597146 GMPR2Q9P2T1 348 aaKnown RBP12.98□□□□□ -0.33
LIG1-214ENST00000597146 STX18Q9P2W9 335 aaKnown RBP12.98□□□□□ -0.33
LIG1-214ENST00000597146 DNAH9Q9NYC9 4486 aa12.98□□□□□ -0.33
LIG1-214ENST00000597146 F5H0A9 414 aaPredicted RBP12.97□□□□□ -0.33
LIG1-214ENST00000597146 IGHV3-13P01766 116 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 IGHG1P01857 330 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 QDPRP09417 244 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 CSF1P09603 554 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 ASAH2BP0C7U1 165 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 AQP2P41181 271 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 DAP3P51398 398 aaKnown RBP12.97□□□□□ -0.33
LIG1-214ENST00000597146 MMP15P51511 669 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 UGT2B15P54855 530 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 LOXL3P58215 753 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 RPL18Q07020 188 aaKnown RBP12.97□□□□□ -0.33
LIG1-214ENST00000597146 Q6YL49 198 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 CBLL1Q75N03 491 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 PIWIL3Q7Z3Z3 882 aaKnown RBP12.97□□□□□ -0.33
LIG1-214ENST00000597146 TSPYL5Q86VY4 417 aaPredicted RBP12.97□□□□□ -0.33
LIG1-214ENST00000597146 KLHL36Q8N4N3 616 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 SPICQ8N5J4 248 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms