RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 CAPZA2P47755 286 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 GP2P55259 537 aaKnown RBP12.85□□□□□ -0.35
VRK3-212ENST00000596814 TGFBR3Q03167 851 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 DOC2BQ14184 412 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 LRRN1Q6UXK5 716 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 BEND4Q6ZU67 534 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 GPR141Q7Z602 305 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 ZNF610Q8N9Z0 462 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 RND1Q92730 232 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 COG8Q96MW5 612 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 MGLLQ99685 303 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 KCNN2Q9H2S1 579 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 PIGMQ9H3S5 423 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 ZNF629Q9UEG4 869 aaPredicted RBP12.85□□□□□ -0.35
VRK3-212ENST00000596814 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
VRK3-212ENST00000596814 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 RER1O15258 196 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 SULT1C4O75897 302 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 BMP5P22003 454 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 ROM1Q03395 351 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 MLLT11Q13015 90 aaPredicted RBP12.85□□□□□ -0.35
VRK3-212ENST00000596814 ANKRD16Q6P6B7 361 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 VASH1Q7L8A9 365 aaPredicted RBP12.85□□□□□ -0.35
VRK3-212ENST00000596814 KRT77Q7Z794 578 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 SATL1Q86VE3 508 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 KLBQ86Z14 1044 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 SKA3Q8IX90 412 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 YIPF7Q8N8F6 280 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 GJC3Q8NFK1 279 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 RNF133Q8WVZ7 376 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 TMIGD2Q96BF3 282 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 SLAMF6Q96DU3 332 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 BBC3Q96PG8 261 aaPredicted RBP12.85□□□□□ -0.35
VRK3-212ENST00000596814 WACQ9BTA9 647 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 MROQ9BYG7 248 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 TRIM36Q9NQ86 728 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 ACOXLQ9NUZ1 547 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 SLCO1C1Q9NYB5 712 aa12.85□□□□□ -0.35
VRK3-212ENST00000596814 ZNF878C9JN71 531 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 DVL2O14641 736 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 MSTNO14793 375 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 LYZL6O75951 148 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 ABHD16AO95870 558 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 TACSTD2P09758 323 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 PCBD1P61457 104 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 SCRN3Q0VDG4 424 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 ARMCX4Q5H9R4 360 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 SYT9Q86SS6 491 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 EGFL6Q8IUX8 553 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 ZNF679Q8IYX0 411 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 OR13F1Q8NGS4 319 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 PELI1Q96FA3 418 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 OPALINQ96PE5 141 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 ISYNA1Q9NPH2 558 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 CENPMQ9NSP4 180 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 BABAM2Q9NXR7 383 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 NBASA2RRP1 2371 aa12.84□□□□□ -0.35
VRK3-212ENST00000596814 KALRNO60229 2985 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 CIB4A0PJX0 185 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 EEF1E1-BLOC1S5C9J1V9 151 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 CCL21O00585 134 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 EEF1E1O43324 174 aaKnown RBP12.83□□□□□ -0.36
VRK3-212ENST00000596814 RAD51DO75771 328 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 LALBAP00709 142 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 H2BFMP0C1H6 154 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 ZNF32P17041 273 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 OPRL1P41146 370 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 RIDAP52758 137 aaKnown RBP12.83□□□□□ -0.36
VRK3-212ENST00000596814 GBX2P52951 348 aaPredicted RBP12.83□□□□□ -0.36
VRK3-212ENST00000596814 TAS2R43P59537 309 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 HIST1H3AP68431 136 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 BDH1Q02338 343 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 TLE1Q04724 770 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 ACSM1Q08AH1 577 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 P2RY6Q15077 328 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 TBRG1Q3YBR2 411 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 SLC36A2Q495M3 483 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 HIKESHIQ53FT3 197 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 HIST2H3PS2Q5TEC6 136 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 OR7E24Q6IFN5 339 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 DEGS2Q6QHC5 323 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 HIST2H3AQ71DI3 136 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 LUZP2Q86TE4 346 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 ZNF433Q8N7K0 673 aaPredicted RBP12.83□□□□□ -0.36
VRK3-212ENST00000596814 GALNT11Q8NCW6 608 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 C1orf162Q8NEQ5 155 aaPredicted RBP12.83□□□□□ -0.36
VRK3-212ENST00000596814 OR10S1Q8NGN2 331 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 ELOVL3Q9HB03 270 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 PNRC2Q9NPJ4 139 aaKnown RBP12.83□□□□□ -0.36
VRK3-212ENST00000596814 GALNT8Q9NY28 637 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 LRP12Q9Y561 859 aa12.83□□□□□ -0.36
VRK3-212ENST00000596814 ZFYVE26Q68DK2 2539 aa12.82□□□□□ -0.36
VRK3-212ENST00000596814 ZNF254O75437 659 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms