RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RPS27P42677 84 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 CASP6P55212 293 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 GP2P55259 537 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 OR12D2P58182 307 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 MRPS34P82930 218 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 EGR3Q06889 387 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 GTF3C1Q12789 2109 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 FAPQ12884 760 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 PCK2Q16822 640 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 CDONQ4KMG0 1287 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 TP53I3Q53FA7 332 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 FBXW9Q5XUX1 488 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 KCTD18Q6PI47 426 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 LINGO2Q7L985 606 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 SSX6Q7RTT6 188 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 KRT77Q7Z794 578 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 KLBQ86Z14 1044 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 EGFL6Q8IUX8 553 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 SYS1Q8N2H4 156 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 YIPF7Q8N8F6 280 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 OR13F1Q8NGS4 319 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 OR6K3Q8NGY3 331 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF837Q96EG3 531 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 C4orf36Q96KX1 117 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 ZFP3Q96NJ6 502 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 ALKBH3Q96Q83 286 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 FOXB1Q99853 325 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 ABHD6Q9BV23 337 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 TTTY10Q9BZA0 68 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 NELFAQ9H3P2 528 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 C1orf198Q9H425 327 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 ISG20L2Q9H9L3 353 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 SIAEQ9HAT2 523 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 PRSS50Q9UI38 385 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 GNG8Q9UK08 70 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 IKZF2Q9UKS7 526 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 SLC5A6Q9Y289 635 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 SMIM31A0A1B0GVY4 71 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 CCDC160A6NGH7 325 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 H3BSA7 217 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 MAGEB4O15481 346 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 SULT1C4O75897 302 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 FARS2O95363 451 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 EDNRAP25101 427 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 KIR2DL2P43627 348 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 MLLT11Q13015 90 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 TSTQ16762 297 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 FAM27BQ5VT28 67 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 CORO6Q6QEF8 472 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF813Q6ZN06 617 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 SEM1Q6ZVN7 128 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 FAM220AQ7Z4H9 259 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 DCXRQ7Z4W1 244 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 CLVS1Q8IUQ0 354 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 LRRC18Q8N456 261 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 MROQ9BYG7 248 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 PLSCR4Q9NRQ2 329 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 CENPMQ9NSP4 180 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 CYB5R1Q9UHQ9 305 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 PROCRQ9UNN8 238 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 KLHDC2Q9Y2U9 406 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 FAM215AQ9Y5M1 114 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 TACC2O95359 2948 aa11.48□□□□□ -0.57
SHKBP1-209ENST00000595803 PSMD9O00233 223 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 CST2P09228 141 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 OR8G3PP0DMU2 310 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 GLI4P10075 376 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 CD36P16671 472 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 MPGP29372 298 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 TAS2R43P59537 309 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 ACSM1Q08AH1 577 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 FOXF2Q12947 444 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 MRPL28Q13084 256 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 TAF13Q15543 124 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 GPR107Q5VW38 600 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 TMEM211Q6ICI0 200 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 C3P1Q6ZMU1 363 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 SLC22A24Q8N4F4 322 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 RFLNBQ8N5W9 214 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF485Q8NCK3 441 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 ST6GALNAC3Q8NDV1 305 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 GJC3Q8NFK1 279 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 OR52N5Q8NH56 324 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 HAVCR2Q8TDQ0 301 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 HTRA1Q92743 480 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 UFD1Q92890 307 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 NABP1Q96AH0 204 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF416Q9BWM5 594 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 ELOVL3Q9HB03 270 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms