RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 NDRG4Q9ULP0 352 aaKnown RBP13.77□□□□□ -0.21
LIG1-205ENST00000593425 AUP1Q9Y679 476 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 MEGF8Q7Z7M0 2845 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 TRAV27A0A087WT01 109 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 A0A0G2JND7 137 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 A8MXK9 166 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 F5H0A9 414 aaPredicted RBP13.76□□□□□ -0.21
LIG1-205ENST00000593425 ERFP50548 548 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 BTG1P62324 171 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 ST3GAL3Q11203 375 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 CYBRD1Q53TN4 286 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 ZER1Q7Z7L7 766 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 KLHL36Q8N4N3 616 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 SPICQ8N5J4 248 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 OR2Z1Q8NG97 314 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 OR8J3Q8NGG0 315 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 OR51A7Q8NH64 312 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 ITLN1Q8WWA0 313 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 SAMD8Q96LT4 415 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 PRRC1Q96M27 445 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 ZNF583Q96ND8 569 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 TBCCD1Q9NVR7 557 aa13.76□□□□□ -0.21
LIG1-205ENST00000593425 C12orf71A8MTZ7 269 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 DOK2O60496 412 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 EDF1O60869 148 aaKnown RBP13.75□□□□□ -0.21
LIG1-205ENST00000593425 GSTM3P21266 225 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 KITLGP21583 273 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 GUCA1AP43080 201 aaPredicted RBP13.75□□□□□ -0.21
LIG1-205ENST00000593425 YAP1P46937 504 aaKnown RBP13.75□□□□□ -0.21
LIG1-205ENST00000593425 HTR5AP47898 357 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 BAMBIQ13145 260 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 FAM205BPQ63HN1 556 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 ERICH5Q6P6B1 374 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 SYT9Q86SS6 491 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 LRRC28Q86X40 367 aaPredicted RBP13.75□□□□□ -0.21
LIG1-205ENST00000593425 NRMQ8IXM6 262 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 NPEPL1Q8NDH3 523 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 C10orf82Q8WW14 230 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
LIG1-205ENST00000593425 TPD52L3Q96J77 140 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 SH3GL1Q99961 368 aa13.75□□□□□ -0.21
LIG1-205ENST00000593425 SOX21Q9Y651 276 aaPredicted RBP13.75□□□□□ -0.21
LIG1-205ENST00000593425 A6NIZ1 184 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 J3KTA2 159 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 COX5BP10606 129 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 TNFRSF1AP19438 455 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 TNFSF4P23510 183 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 KDELR2P33947 212 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 RAP1BP61224 184 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 RAP1AP62834 184 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 OTPQ5XKR4 325 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 ARL9Q6T311 187 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 OR13C2Q8NGS9 318 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 SLC7A6Q92536 515 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 CMBLQ96DG6 245 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 OR2V2Q96R30 315 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 GPA33Q99795 319 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 MRI1Q9BV20 369 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 UNKLQ9H9P5 680 aaKnown RBP13.74□□□□□ -0.21
LIG1-205ENST00000593425 ZMAT3Q9HA38 289 aaKnown RBP13.74□□□□□ -0.21
LIG1-205ENST00000593425 MAN2C1Q9NTJ4 1040 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 RHCGQ9UBD6 479 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 IL19Q9UHD0 177 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 PPP1R3CQ9UQK1 317 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 STARD10Q9Y365 291 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 ADAM18Q9Y3Q7 739 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 SNX13Q9Y5W8 968 aa13.74□□□□□ -0.21
LIG1-205ENST00000593425 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 CEACAM18A8MTB9 384 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 FAM220BPB1ANY3 271 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 MRASO14807 208 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 SGCEO43556 437 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 IFNA14P01570 189 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
LIG1-205ENST00000593425 IGHV4-38-2P0DP08 117 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 MMP16P51512 607 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 PRKCDQ05655 676 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 SCRN3Q0VDG4 424 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 ESCO2Q56NI9 601 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 MESTQ5EB52 335 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 METTL21CQ5VZV1 264 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
LIG1-205ENST00000593425 JAZF1Q86VZ6 243 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 TMEM120AQ9BXJ8 343 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 OR5V1Q9UGF6 321 aa13.73□□□□□ -0.21
LIG1-205ENST00000593425 HTR3EA5X5Y0 456 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 EFCAB9A8MZ26 197 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 TMEM178BH3BS89 294 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 ZNF26P17031 533 aaPredicted RBP13.72□□□□□ -0.21
LIG1-205ENST00000593425 CD80P33681 288 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 MDH2P40926 338 aaKnown RBP13.72□□□□□ -0.21
LIG1-205ENST00000593425 SELENOWP63302 87 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 PAX2Q02962 417 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 PAX8Q06710 450 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 SLC9A3R2Q15599 337 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 COQ5Q5HYK3 327 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 C1orf94Q6P1W5 598 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 VTCN1Q7Z7D3 282 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 OAFQ86UD1 273 aa13.72□□□□□ -0.21
LIG1-205ENST00000593425 OFCC1Q8IZS5 231 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms