RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZNF776Q68DI1 518 aaPredicted RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 RTL6Q6ICC9 239 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF562Q6V9R5 426 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 P4HA3Q7Z4N8 544 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 MOB3BQ86TA1 216 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ACOT1Q86TX2 421 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 CATSPER3Q86XQ3 398 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ERI1Q8IV48 349 aaKnown RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 CSNK1A1LQ8N752 337 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 NFAM1Q8NET5 270 aaPredicted RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 OR1F12Q8NHA8 337 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 NANPQ8TBE9 248 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ACOT11Q8WXI4 607 aaPredicted RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 LZICQ8WZA0 190 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 CXorf58Q96LI9 332 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 SERPINB11Q96P15 392 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 SLC38A2Q96QD8 506 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ATF6BQ99941 703 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 DCTN5Q9BTE1 182 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 DCUN1D5Q9BTE7 237 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ULBP2Q9BZM5 246 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 SLITRK2Q9H156 845 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 PARVBQ9HBI1 364 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ZC4H2Q9NQZ6 224 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 NANSQ9NR45 359 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 BATF3Q9NR55 127 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 NECAP2Q9NVZ3 263 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 STOML2Q9UJZ1 356 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 CLEC4EQ9ULY5 219 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 SPATA2Q9UM82 520 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 PRPF19Q9UMS4 504 aaKnown RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 NPIPA1Q9UND3 350 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 SLC22A13Q9Y226 551 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 POLDIP2Q9Y2S7 368 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 MRPS18CQ9Y3D5 142 aaKnown RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 CSAG2Q9Y5P2 127 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 ARAP2Q8WZ64 1704 aa3.94□□□□□ -1.78
SMAD4-216ENST00000593223 SIPA1L3O60292 1781 aaPredicted RBP3.94□□□□□ -1.78
SMAD4-216ENST00000593223 NBPF19A0A087WUL8 3843 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 DNHD1Q96M86 4753 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TMEM114B3SHH9 223 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SMLR1H3BR10 107 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SIVA1O15304 175 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF749O43361 778 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SNAI2O43623 268 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 PSIP1O75475 530 aaKnown RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 FARS2O95363 451 aaKnown RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 BRI3O95415 125 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 ALDOBP05062 364 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 GSTT2P0CG29 244 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 GSTT2BP0CG30 244 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TSPAN8P19075 237 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 CD1CP29017 333 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 PGFP49763 221 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 NDUFV3P56181 108 aaKnown RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 RIPPLY3P57055 190 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 RPS6P62753 249 aaKnown RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 NAAAQ02083 359 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF33AQ06730 810 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SERTAD2Q14140 314 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TRAM2Q15035 370 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 OR4D1Q15615 310 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 MLF2Q15773 248 aaPredicted RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 MRPL23Q16540 153 aaKnown RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SLC36A2Q495M3 483 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 OR2G6Q5TZ20 316 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 C9orf135Q5VTT2 229 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 AGAP7PQ5VUJ5 663 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 C22orf42Q6IC83 251 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 NEPROQ6NW34 567 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SLC16A14Q7RTX9 510 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TIPARPQ7Z3E1 657 aaKnown RBP3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SLC25A42Q86VD7 318 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SLC47A2Q86VL8 602 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TMEM17Q86X19 198 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 ELMOD1Q8N336 334 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SPEM1Q8N4L4 309 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 JAGN1Q8N5M9 183 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 TRAM1L1Q8N609 369 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 POM121L12Q8N7R1 296 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 LRRC75AQ8NAA5 344 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SDR9C7Q8NEX9 313 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 OR8K1Q8NGG5 319 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 OR13C5Q8NGS8 318 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 LGALS14Q8TCE9 139 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 NTAN1Q96AB6 310 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 BIRC7Q96CA5 298 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 BPIFA2Q96DR5 249 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 NUS1Q96E22 293 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 OR5B2Q96R09 309 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 NICN1Q9BSH3 213 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 SLC22A4Q9H015 551 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 GBA3Q9H227 469 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 LHX5Q9H2C1 402 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 C1orf198Q9H425 327 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 ANKRD19PQ9H560 264 aa3.93□□□□□ -1.78
SMAD4-216ENST00000593223 WDR55Q9H6Y2 383 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms