RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CDADC1Q9BWV3 514 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 NELFAQ9H3P2 528 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 NDUFB11Q9NX14 153 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 CYB5R1Q9UHQ9 305 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 MRM2Q9UI43 246 aaKnown RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 CLEC4AQ9UMR7 237 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 OSGIN2Q9Y236 505 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 GTF3C1Q12789 2109 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 PRR32B1ATL7 298 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 H3BMQ9 156 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 RPL36A-HNRNPH2H7BZ11 118 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 MAGEB4O15481 346 aaPredicted RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 OGG1O15527 345 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 PLPP2O43688 288 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 ZG16O60844 167 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 WDR1O75083 606 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 SS18L1O75177 396 aaPredicted RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 ABHD16AO95870 558 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 CD1AP06126 327 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 HOXD4P09016 255 aaPredicted RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 CELP19835 753 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 MSR1P21757 451 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 GADD45AP24522 165 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 AGTR1P30556 359 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 CDAP32320 146 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 TGM4P49221 684 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 TDGF1P3P51864 188 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 SIRPAP78324 504 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 EIF2B1Q14232 305 aaKnown RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 CTF1Q16619 201 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 CNPY1Q3B7I2 92 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 NRN1LQ496H8 165 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 ACSF3Q4G176 576 aaPredicted RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 FAM27BQ5VT28 67 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 LIPNQ5VXI9 398 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 OTPQ5XKR4 325 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 OR2A2Q6IF42 318 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 RPL22L1Q6P5R6 122 aaKnown RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 DEGS2Q6QHC5 323 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 RHOUQ7L0Q8 258 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 FAM220AQ7Z4H9 259 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 ZNF679Q8IYX0 411 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 OR5M9Q8NGP3 310 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 OR52N5Q8NH56 324 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 ST7LQ8TDW4 575 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 NABP1Q96AH0 204 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 APH1AQ96BI3 265 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 AMELYQ99218 206 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 SLX1AQ9BQ83 275 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 C1orf198Q9H425 327 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 CRLF2Q9HC73 371 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 GPR35Q9HC97 309 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 EMC7Q9NPA0 242 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 GNG8Q9UK08 70 aa11.85□□□□□ -0.51
VMP1-217ENST00000593168 SF3B6Q9Y3B4 125 aaKnown RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 PHF3Q92576 2039 aaKnown RBP11.85□□□□□ -0.51
VMP1-217ENST00000593168 ZGRF1Q86YA3 2104 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 CELSR1Q9NYQ6 3014 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 C2CD3Q4AC94 2353 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 E9PI62 339 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ZNHIT1O43257 154 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 AIREO43918 545 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ZNF254O75437 659 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 KRT33AO76009 404 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 OR8G3PP0DMU2 310 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 GUSBP1Q15486 140 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 SGCAQ16586 387 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 DMKNQ6E0U4 476 aaPredicted RBP11.84□□□□□ -0.51
VMP1-217ENST00000593168 ZNF585AQ6P3V2 769 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 LINGO2Q7L985 606 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 NUFIP2Q7Z417 695 aaKnown RBP11.84□□□□□ -0.51
VMP1-217ENST00000593168 DCXRQ7Z4W1 244 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ZNF100Q8IYN0 542 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ALDH16A1Q8IZ83 802 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 YIPF7Q8N8F6 280 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 OR2AJ1Q8NGZ0 328 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 FAM57AQ8TBR7 257 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ZNF837Q96EG3 531 aaPredicted RBP11.84□□□□□ -0.51
VMP1-217ENST00000593168 ALKBH3Q96Q83 286 aaPredicted RBP11.84□□□□□ -0.51
VMP1-217ENST00000593168 TM9SF2Q99805 663 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 COQ7Q99807 217 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 WACQ9BTA9 647 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 MROQ9BYG7 248 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 TTTY10Q9BZA0 68 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 SIAEQ9HAT2 523 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ELOVL3Q9HB03 270 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 SLC7A10Q9NS82 523 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 TMEM38BQ9NVV0 291 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 SLCO1C1Q9NYB5 712 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 ST6GALNAC2Q9UJ37 374 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 IKZF2Q9UKS7 526 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 STUB1Q9UNE7 303 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 LHFPL6Q9Y693 200 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 SIRT4Q9Y6E7 314 aaPredicted RBP11.84□□□□□ -0.51
VMP1-217ENST00000593168 ADGRG4Q8IZF6 3080 aa11.84□□□□□ -0.51
VMP1-217ENST00000593168 MED12LQ86YW9 2145 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms