RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 TEAD3Q99594 435 aa8.4□□□□□ -1.06
DDX39A-220ENST00000593008 PRRG3Q9BZD7 231 aa8.4□□□□□ -1.06
DDX39A-220ENST00000593008 SLC17A5Q9NRA2 495 aa8.4□□□□□ -1.06
DDX39A-220ENST00000593008 RAB26Q9ULW5 256 aa8.4□□□□□ -1.06
DDX39A-220ENST00000593008 MYRFQ9Y2G1 1151 aa8.4□□□□□ -1.06
DDX39A-220ENST00000593008 C5orf63A6NC05 138 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 OR5H1A6NKK0 313 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 DEFB108AA8MXU0 73 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 AHCYL1O43865 530 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 MMP7P09237 267 aaPredicted RBP8.39□□□□□ -1.07
DDX39A-220ENST00000593008 CD79AP11912 226 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 CCL2P13500 99 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 PSMB1P20618 241 aaKnown RBP8.39□□□□□ -1.07
DDX39A-220ENST00000593008 HSPA13P48723 471 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF83P51522 516 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 HSF2Q03933 536 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 HGFACQ04756 655 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 IL18R1Q13478 541 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 P2RY6Q15077 328 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 SLC18B1Q6NT16 456 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 ANKRD16Q6P6B7 361 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 SLC16A14Q7RTX9 510 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 DPY19L4Q7Z388 723 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF584Q8IVC4 421 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 PAQR4Q8N4S7 273 aaPredicted RBP8.39□□□□□ -1.07
DDX39A-220ENST00000593008 SETD9Q8NE22 299 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 BPIFB6Q8NFQ5 453 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 FNDC8Q8TC99 324 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 HS3ST6Q96QI5 342 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 INTS14Q96SY0 518 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 CNN2Q99439 309 aaKnown RBP8.39□□□□□ -1.07
DDX39A-220ENST00000593008 TEX12Q9BXU0 123 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 WNT5BQ9H1J7 359 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 PNRC2Q9NPJ4 139 aaKnown RBP8.39□□□□□ -1.07
DDX39A-220ENST00000593008 CLN6Q9NWW5 311 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 ST6GALNAC2Q9UJ37 374 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 POLR1DQ9Y2S0 133 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 SLC25A15Q9Y619 301 aa8.39□□□□□ -1.07
DDX39A-220ENST00000593008 ABCA4P78363 2273 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 SLC1A7O00341 560 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF593O00488 134 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 FAM20BO75063 409 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 DBHP09172 617 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 SBK2P0C263 348 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 CRYGSP22914 178 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 GUCA1AP43080 201 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ENTPD1P49961 510 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 IDH3GP51553 393 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ART1P52961 327 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 CDH15P55291 814 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 PSG4Q00888 419 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 TGFBR3Q03167 851 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF85Q03923 595 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 GLO1Q04760 184 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 GGTLC2Q14390 218 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 RAB39AQ14964 217 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 KCNMB1Q16558 191 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 CCDC92Q53HC0 331 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 PABPC1L2AQ5JQF8 200 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 SLC25A30Q5SVS4 291 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 C6orf141Q5SZD1 244 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 LCN1P1Q5VSP4 162 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 AHSA2Q719I0 299 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF627Q7L945 461 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 GID4Q8IVV7 300 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 SLC35F2Q8IXU6 374 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF786Q8N393 782 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 CPEB3Q8NE35 698 aaKnown RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 OR10H4Q8NGA5 316 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 OR10H5Q8NGA6 315 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 OR52I1Q8NGK6 324 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ST7LQ8TDW4 575 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 TRUB1Q8WWH5 349 aaKnown RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 GGHQ92820 318 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 ZNF75AQ96N20 296 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 OR2H1Q9GZK4 316 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 PLEKHF2Q9H8W4 249 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 MARCH7Q9H992 704 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 SIAEQ9HAT2 523 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 MOV10Q9HCE1 1003 aaKnown RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 B3GNT2Q9NY97 397 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 CYB5R1Q9UHQ9 305 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 GDF2Q9UK05 429 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 FBXL3Q9UKT7 428 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 EDARQ9UNE0 448 aa8.38□□□□□ -1.07
DDX39A-220ENST00000593008 MAP1AP78559 2803 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-220ENST00000593008 IGHV1-18A0A0C4DH31 117 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 SLC22A31A6NKX4 558 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 C12orf71A8MTZ7 269 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 J3QRE1 110 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 M0R1B8 84 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 DENRO43583 198 aaKnown RBP8.37□□□□□ -1.07
DDX39A-220ENST00000593008 DOK2O60496 412 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 HTR1AP08908 422 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 CST2P09228 141 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 OR8G3PP0DMU2 310 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 PPP3CBP16298 524 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 DNASE1P24855 282 aa8.37□□□□□ -1.07
DDX39A-220ENST00000593008 APEX1P27695 318 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 272.6 ms