RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 DEAF1O75398 565 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-227ENST00000591849 MPZL1O95297 269 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 SNAP29O95721 258 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 MT-ND5P03915 603 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 SCG5P05408 212 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 CSF3P09919 207 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF823P16415 610 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 PCSK6P29122 969 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 EVX1P49640 407 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 PPOXP50336 477 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 PDLIM4P50479 330 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 LSM6P62312 80 aaKnown RBP8.68□□□□□ -1.02
BRCA1-227ENST00000591849 AQP6Q13520 282 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 ENDOGQ14249 297 aaKnown RBP8.68□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF718Q3SXZ3 478 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 OTPQ5XKR4 325 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF770Q6IQ21 691 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-227ENST00000591849 CLEC9AQ6UXN8 241 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 FOXL2NBQ6ZUU3 175 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 BIVMQ86UB2 503 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 PAQR4Q8N4S7 273 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-227ENST00000591849 CYB561A3Q8NBI2 242 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 PROKR2Q8NFJ6 384 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 NEU4Q8WWR8 484 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-227ENST00000591849 DOK1Q99704 481 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 REG4Q9BYZ8 158 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 MS4A5Q9H3V2 200 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 ARMC1Q9NVT9 282 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 SLCO1C1Q9NYB5 712 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 IL20Q9NYY1 176 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 TAAR3PQ9P1P4 343 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 ASH2LQ9UBL3 628 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 GRIP1Q9Y3R0 1128 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 TMEM129A0AVI4 362 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 TIPRLO75663 272 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 ABHD16AO95870 558 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 GPANK1O95872 356 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 TP53P04637 393 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-227ENST00000591849 IGFBP1P08833 259 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-227ENST00000591849 ANXA8P13928 327 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 PRKACGP22612 351 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 ALDH3B1P43353 468 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 KLF3P57682 345 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-227ENST00000591849 TEKQ02763 1124 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 MEP1BQ16820 701 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 ALKBH6Q3KRA9 238 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 TMEM154Q6P9G4 183 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 LRP11Q86VZ4 500 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 OR6V1Q8N148 313 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF525Q8N782 197 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 GJC3Q8NFK1 279 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 OR2T4Q8NH00 348 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 ABHD4Q8TB40 342 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 POM121L2Q96KW2 1035 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 C4orf45Q96LM5 186 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 SORCS2Q96PQ0 1159 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 NIPSNAP1Q9BPW8 284 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 PLA2G12AQ9BZM1 189 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 RACGAP1Q9H0H5 632 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 TPK1Q9H3S4 243 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 FN3KQ9H479 309 aa8.67□□□□□ -1.02
BRCA1-227ENST00000591849 GSX1Q9H4S2 264 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-227ENST00000591849 LOC100509620A0A075B734 347 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 IGLV1-36A0A0B4J1U3 117 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 OR6C68A6NDL8 312 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 ARRDC5A6NEK1 342 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 DCTN6O00399 190 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 BHLHE40O14503 412 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 TPD52L2O43399 206 aaKnown RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 LY6HO94772 140 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 COX5BP10606 129 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF3P17036 446 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PAICSP22234 425 aaKnown RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 FASP25445 335 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 FMO3P31513 532 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PYCR1P32322 319 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PPP1CBP62140 327 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 GINS1Q14691 196 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 MAD2L1BPQ15013 274 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 KCNMB1Q16558 191 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 SPATA46Q5T0L3 261 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 CD300LDQ6UXZ3 194 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 Q71RC1 249 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 VASH1Q7L8A9 365 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 TMEM179BQ7Z7N9 219 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 C1orf174Q8IYL3 243 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 ZCCHC24Q8N2G6 241 aaKnown RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 CIARTQ8N365 385 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 LNX2Q8N448 690 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 SLC37A3Q8NCC5 494 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PAPD5Q8NDF8 572 aaKnown RBP8.66□□□□□ -1.02
BRCA1-227ENST00000591849 NPEPL1Q8NDH3 523 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 OR8D4Q8NGM9 314 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 OR9Q1Q8NGQ5 310 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 OR1F12Q8NHA8 337 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PLEKHA8Q96JA3 519 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 COX4I2Q96KJ9 171 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PITX2Q99697 317 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 SMR3AQ99954 134 aa8.66□□□□□ -1.02
BRCA1-227ENST00000591849 PIMREGQ9BSJ6 248 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms