RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TPK1Q9H3S4 243 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 METTL17Q9H7H0 456 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-226ENST00000591534 HIF1ANQ9NWT6 349 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 ERVK13-1Q9NX77 482 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 RIMS3Q9UJD0 308 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 FBXL7Q9UJT9 491 aa8.11□□□□□ -1.11
BRCA1-226ENST00000591534 A0A087WUJ7 227 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 A0A1B0GWA3 101 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 A0A1W2PPW3 197 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 TRAPPC13A5PLN9 417 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 H0YAE9 185 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 TRIM77I1YAP6 450 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 PPIHO43447 177 aaKnown RBP8.1□□□□□ -1.11
BRCA1-226ENST00000591534 FZD7O75084 574 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 CCNB2O95067 398 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 OR6A2O95222 327 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 FARS2O95363 451 aaKnown RBP8.1□□□□□ -1.11
BRCA1-226ENST00000591534 PTHP01270 115 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 HLA-HP01893 362 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SEMG1P04279 462 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 IL2RGP31785 369 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 LIMS1P48059 325 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 RAB1AP62820 205 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 MYBPC1Q00872 1141 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SPIBQ01892 262 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 EGR4Q05215 589 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 PIGFQ07326 219 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 PUDPQ08623 228 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 DUSP7Q16829 419 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 PCGF3Q3KNV8 242 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 CARD17Q5XLA6 110 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 USP43Q70EL4 1123 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF627Q7L945 461 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 PXKQ7Z7A4 578 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 TMEM123Q8N131 208 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 C10orf53Q8N6V4 93 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 C3orf56Q8N813 242 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SMYD1Q8NB12 490 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SETD9Q8NE22 299 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 GIPC3Q8TF64 312 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SNX33Q8WV41 574 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 LRTOMTQ8WZ04 291 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 GCDHQ92947 438 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-226ENST00000591534 C7orf34Q96L11 122 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 ARHGDIGQ99819 225 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 MRPL37Q9BZE1 423 aaKnown RBP8.1□□□□□ -1.11
BRCA1-226ENST00000591534 GABARAPL1Q9H0R8 117 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 C1orf198Q9H425 327 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 HEATR1Q9H583 2144 aaKnown RBP8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SEC61A2Q9H9S3 476 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SMPD3Q9NY59 655 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-226ENST00000591534 B3GNT2Q9NY97 397 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 SLCO1C1Q9NYB5 712 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 USE1Q9NZ43 259 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 NDUFAF4Q9P032 175 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 B3GAT1Q9P2W7 334 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF281Q9Y2X9 895 aa8.1□□□□□ -1.11
BRCA1-226ENST00000591534 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.1□□□□□ -1.113e-7■■■■■ 41.1
BRCA1-226ENST00000591534 SNTNA6NMZ2 147 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 SPRY1O43609 319 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-226ENST00000591534 TRAF3IP2O43734 574 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-226ENST00000591534 MPZL2O60487 215 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 TPST2O60704 377 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 PNPP00491 289 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 MT-ATP6P00846 226 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF35P13682 527 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 ZNF14P17017 642 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-226ENST00000591534 AHCYP23526 432 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 CFPP27918 469 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 HTR2AP28223 471 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 CSNK1A1P48729 337 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 CSNK2BP67870 215 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 MED21Q13503 144 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 MICAQ29983 383 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 ACSM5Q6NUN0 579 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 FAHD2BQ6P2I3 314 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-226ENST00000591534 TMEM154Q6P9G4 183 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 UNQ6126/PRO20091Q6UXV3 157 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-226ENST00000591534 ATG16L2Q8NAA4 619 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 OR1J2Q8NGS2 313 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 CLDND2Q8NHS1 167 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 SLCO4A1Q96BD0 722 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 RAB39BQ96DA2 213 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 FAHD2AQ96GK7 314 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 SLC41A3Q96GZ6 507 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 FOXB1Q99853 325 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 PKP2Q99959 881 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 APOL4Q9BPW4 351 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 SYT3Q9BQG1 590 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 NMNAT1Q9HAN9 279 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-226ENST00000591534 MRPL39Q9NYK5 338 aaKnown RBP8.09□□□□□ -1.11
BRCA1-226ENST00000591534 SEC14L4Q9UDX3 406 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 OAZ3Q9UMX2 235 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 LRCH1Q9Y2L9 728 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 LRRC42Q9Y546 428 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 HSPE1-MOB4S4R3N1 261 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 V9GYQ6 96 aa8.09□□□□□ -1.11
BRCA1-226ENST00000591534 A0A0G2JMP0 313 aa8.08□□□□□ -1.12
BRCA1-226ENST00000591534 A0A0X1KG70 313 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms