RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 C17orf78Q8N4C9 275 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 OR5AK2Q8NH90 309 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 MS4A8Q9BY19 250 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 BCL2L10Q9HD36 194 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 INPP5EQ9NRR6 644 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 CALML5Q9NZT1 146 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 TIMM10BQ9Y5J6 103 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 PCYT1BQ9Y5K3 369 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-228ENST00000590347 BRINP1O60477 761 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 ABLIM3O94929 683 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 RCBTB2O95199 551 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 CNOT4O95628 575 aaKnown RBP13.72□□□□□ -0.21
CIRBP-228ENST00000590347 THEGLP0DJG4 465 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 CCKBRP32239 447 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 RASGEF1BQ0VAM2 473 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 GAS6Q14393 721 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 MIDNQ504T8 468 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 DCAF4L2Q8NA75 395 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 OR56B1Q8NGI3 324 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 TSEN15Q8WW01 171 aaKnown RBP13.72□□□□□ -0.21
CIRBP-228ENST00000590347 FRRS1LQ9P0K9 344 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 UPB1Q9UBR1 384 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 MMACHCQ9Y4U1 282 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 A0A1W2PR48 441 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 AIFM1O95831 613 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 CD5P06127 495 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 LAMP2P13473 410 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 MAPK8P45983 427 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 ACTC1P68032 377 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 ACTA1P68133 377 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 MRPL2Q5T653 305 aaKnown RBP13.71□□□□□ -0.21
CIRBP-228ENST00000590347 C17orf64Q86WR6 236 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 CDK20Q8IZL9 346 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 SLC39A11Q8N1S5 342 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 TUBA4BQ9H853 241 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 TAF9BQ9HBM6 251 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 SRA1Q9HD15 236 aaKnown RBP13.71□□□□□ -0.21
CIRBP-228ENST00000590347 SIRT7Q9NRC8 400 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 PARPBPQ9NWS1 579 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 ERI3O43414 337 aaKnown RBP13.71□□□□□ -0.21
CIRBP-228ENST00000590347 PLGP00747 810 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-228ENST00000590347 CXCL10P02778 98 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 SFTPBP07988 381 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 NGFRP08138 427 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 CXCL1P09341 107 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 ERV3-1Q14264 604 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 DHCR24Q15392 516 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 UNQ9370/PRO34162Q6UXP9 181 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 ASB17Q8WXJ9 295 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 LGR4Q9BXB1 951 aa13.71□□□□□ -0.21
CIRBP-228ENST00000590347 MRPL22Q9NWU5 206 aaKnown RBP13.71□□□□□ -0.21
CIRBP-228ENST00000590347 MFNGO00587 321 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 TSPAN15O95858 294 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 TRGC2P03986 189 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 JMJD7P0C870 316 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 CALCBP10092 127 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 MAOAP21397 527 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 RPS23P62266 143 aaKnown RBP13.7□□□□□ -0.22
CIRBP-228ENST00000590347 LCN10Q6JVE6 187 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 ANKRD16Q6P6B7 361 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 CHST4Q8NCG5 386 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 GPBAR1Q8TDU6 330 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 FAM3DQ96BQ1 224 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 PHB2Q99623 299 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 AICDAQ9GZX7 198 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 RIMS4Q9H426 269 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-228ENST00000590347 PTGES2Q9H7Z7 377 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 KLHL42Q9P2K6 505 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 KLK13Q9UKR3 277 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 HS3ST3B1Q9Y662 390 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 DOCK8Q8NF50 2099 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 TGIF2-C20orf24A0A0A6YYL0 155 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 TEX13DA0A0J9YY54 714 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-228ENST00000590347 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 LATO43561 262 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 ZNF354AO60765 605 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-228ENST00000590347 TEX30Q5JUR7 227 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 LYG2Q86SG7 212 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 KDF1Q8NAX2 398 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-228ENST00000590347 DTD1Q8TEA8 209 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 MVB12AQ96EY5 273 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 C1orf198Q9H425 327 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 ADAP2Q9NPF8 381 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 TAS2R8Q9NYW2 309 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 IL17BQ9UHF5 180 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 RFNGQ9Y644 331 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 MMP7P09237 267 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-228ENST00000590347 OR2T7P0C7T2 308 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 ZBTB25P24278 435 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 TAS2R19P59542 299 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 PKIAP61925 76 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 ACTA2P62736 377 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 ACTG2P63267 376 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 Q499Y3 187 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 CSNK1A1LQ8N752 337 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 OR2T27Q8NH04 317 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 MARCH1Q8TCQ1 289 aa13.7□□□□□ -0.22
CIRBP-228ENST00000590347 NTNG2Q96CW9 530 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms