RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 SCRN3Q0VDG4 424 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 DAZAP2Q15038 168 aaPredicted RBP10.49□□□□□ -0.73
APOC1-206ENST00000590334 OTPQ5XKR4 325 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 SP5Q6BEB4 398 aaPredicted RBP10.49□□□□□ -0.73
APOC1-206ENST00000590334 CFAP77Q6ZQR2 320 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 SHFQ7M4L6 423 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 CDC20BQ86Y33 519 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 ZNF584Q8IVC4 421 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 OTOSQ8NHW6 89 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 ST7LQ8TDW4 575 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 ZC3HAV1LQ96H79 300 aaKnown RBP10.49□□□□□ -0.73
APOC1-206ENST00000590334 CNN2Q99439 309 aaKnown RBP10.49□□□□□ -0.73
APOC1-206ENST00000590334 MNTQ99583 582 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 CDADC1Q9BWV3 514 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 OR2H1Q9GZK4 316 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 RNF121Q9H920 327 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 PLCXD1Q9NUJ7 323 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 KCNN3Q9UGI6 736 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 ATPIF1Q9UII2 106 aa10.49□□□□□ -0.73
APOC1-206ENST00000590334 EXOGQ9Y2C4 368 aaKnown RBP10.49□□□□□ -0.73
APOC1-206ENST00000590334 RPL36Q9Y3U8 105 aaKnown RBP10.49□□□□□ -0.73
APOC1-206ENST00000590334 IGHV1-18A0A0C4DH31 117 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 OR6C6A6NF89 314 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 RER1O15258 196 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 SYNGR3O43761 229 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 RAB36O95755 333 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 PTHP01270 115 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 SPARCP09486 303 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 RPS27P42677 84 aaKnown RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 SLC15A1P46059 708 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 CXCR4P61073 352 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 RAB35Q15286 201 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 SMN1Q16637 294 aaKnown RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 CCDC92Q53HC0 331 aaPredicted RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 PABPC1L2AQ5JQF8 200 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 CORO6Q6QEF8 472 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 RHOUQ7L0Q8 258 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 DPY19L4Q7Z388 723 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 WFDC8Q8IUA0 241 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 LINC00346Q8IVM7 164 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 ALDH16A1Q8IZ83 802 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 CPEB3Q8NE35 698 aaKnown RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 IL17RDQ8NFM7 739 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 OR6N2Q8NGY6 317 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 OR2AJ1Q8NGZ0 328 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 MAP6Q96JE9 813 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 C1orf198Q9H425 327 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 Q9H521 79 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 PNRC2Q9NPJ4 139 aaKnown RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 PLEKHB1Q9UF11 243 aaPredicted RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 GDF2Q9UK05 429 aaPredicted RBP10.48□□□□□ -0.73
APOC1-206ENST00000590334 POLR1DQ9Y2S0 133 aa10.48□□□□□ -0.73
APOC1-206ENST00000590334 IQCMA0A1B0GVH7 501 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 FAM221AA4D161 298 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 DPRXA6NFQ7 191 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 DEFB108AA8MXU0 73 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 CASKO14936 926 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 SIAH2O43255 324 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 SGCEO43556 437 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 CELA3BP08861 270 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 MRPL3P09001 348 aaKnown RBP10.47□□□□□ -0.73
APOC1-206ENST00000590334 OR2T7P0C7T2 308 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 CECR9P0C854 216 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 ALOX5APP20292 161 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 PTAFRP25105 342 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 LOXP28300 417 aaPredicted RBP10.47□□□□□ -0.73
APOC1-206ENST00000590334 NAA10P41227 235 aaPredicted RBP10.47□□□□□ -0.73
APOC1-206ENST00000590334 ZNF83P51522 516 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 NUDT6P53370 316 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 CSNK2BP67870 215 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 PLP2Q04941 152 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 RAB40BQ12829 278 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 RAB39AQ14964 217 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 KRTAP27-1Q3LI81 207 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 KLHL22Q53GT1 634 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 BEX5Q5H9J7 111 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 ELFN2Q5R3F8 820 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 C6orf141Q5SZD1 244 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 NCMAPQ5T1S8 102 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 ZNF774Q6NX45 483 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 TMEM108Q6UXF1 575 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 VASH1Q7L8A9 365 aaPredicted RBP10.47□□□□□ -0.73
APOC1-206ENST00000590334 DCXRQ7Z4W1 244 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 MYPOPQ86VE0 399 aaPredicted RBP10.47□□□□□ -0.73
APOC1-206ENST00000590334 OR51G2Q8NGK0 314 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 OR10S1Q8NGN2 331 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 OR2T27Q8NH04 317 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 AKR7LQ8NHP1 331 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 LGALS12Q96DT0 336 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 RNFT2Q96EX2 444 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 COQ7Q99807 217 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 ABHD6Q9BV23 337 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 C1QTNF6Q9BXI9 259 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 HDHD2Q9H0R4 259 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 ESRP2Q9H6T0 727 aaKnown RBP10.47□□□□□ -0.73
APOC1-206ENST00000590334 DDX28Q9NUL7 540 aaKnown RBP10.47□□□□□ -0.73
APOC1-206ENST00000590334 LRRC42Q9Y546 428 aa10.47□□□□□ -0.73
APOC1-206ENST00000590334 PCDHGB1Q9Y5G3 927 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms