RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 AGBL5Q8NDL9 886 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 OR1J4Q8NGS1 313 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 FOXRED1Q96CU9 486 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 CENPMQ9NSP4 180 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 TAS2R4Q9NYW5 299 aa17.12■□□□□ 0.33
PRKCSH-209ENST00000589838 TRAV18A0A075B6X5 111 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 LOC107986453A0A1B0GWG9 222 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 ARPC1BO15143 372 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 DKK1O94907 266 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 NDUFB6O95139 128 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 WNT11O96014 354 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 IGHG1P01857 330 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 IL5P05113 134 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 TDGF1P13385 188 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 PRSS3P35030 304 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 PCOLCEQ15113 449 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 EXT1Q16394 746 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 TMEM255AQ5JRV8 349 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 PEAR1Q5VY43 1037 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 NKAIN3Q8N8D7 197 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 FADS6Q8N9I5 356 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 BEST4Q8NFU0 473 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 C11orf40Q8WZ69 217 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 MRPL13Q9BYD1 178 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 ATG5Q9H1Y0 275 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 SCP2D1Q9UJQ7 156 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 MGAT4AQ9UM21 535 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 HDGFL3Q9Y3E1 203 aa17.11■□□□□ 0.33
PRKCSH-209ENST00000589838 KIF26BQ2KJY2 2108 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 A0A087WZY1 265 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 TMEM272A0A1B0GTI8 110 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 C9J4A7 227 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 SULT1C2O00338 296 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 LAMTOR5O43504 91 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 CER1O95813 267 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 PTHLHP12272 177 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 CXCL3P19876 107 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 VEGFCP49767 419 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 MECP2P51608 486 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 PLA2G7Q13093 441 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 PCGF3Q3KNV8 242 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 OPN5Q6U736 354 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 PLPP7Q8NBV4 271 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 SLC25A28Q96A46 364 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 ZBTB8AQ96BR9 441 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 SLAMF6Q96DU3 332 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 OXGR1Q96P68 337 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 C1orf198Q9H425 327 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 ZFP64Q9NPA5 681 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 B3GAT1Q9P2W7 334 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 FLVCR2Q9UPI3 526 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 HRH3Q9Y5N1 445 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 A0A0A6YYH2 397 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 IGKV1D-43A0A0B4J1Z2 117 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 CIB4A0PJX0 185 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 A6NJ64 397 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 D6RAR5 112 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 AKR7A2O43488 359 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 ICMTO60725 284 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 EFNB2P52799 333 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 ZNF239Q16600 458 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 LINC00303Q3SY05 128 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 ASPHD2Q6ICH7 369 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 TMEM81Q6P7N7 255 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 GLDNQ6ZMI3 551 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 BMPERQ8N8U9 685 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 OR5B2Q96R09 309 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 EMC6Q9BV81 110 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 BEX1Q9HBH7 125 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 NPTNQ9Y639 398 aa17.1■□□□□ 0.33
PRKCSH-209ENST00000589838 SNRPGP15A8MWD9 76 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 HPXP02790 462 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 ALDOBP05062 364 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 GLYATL3Q5SZD4 288 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 SLC25A25Q6KCM7 469 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 NOXO1Q8NFA2 376 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 MR1Q95460 341 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 PTX4Q96A99 478 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 ZNF436Q9C0F3 470 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 ZNF700Q9H0M5 742 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 CYB5R1Q9UHQ9 305 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 FBXL2Q9UKC9 423 aa17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 COLQQ9Y215 455 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-209ENST00000589838 PRUNE2Q8WUY3 3088 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 A6NL46 340 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 NTN3O00634 580 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 AKAIN1P0CW23 69 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 CPN1P15169 458 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 ACTBP60709 375 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 SNRPD2P62316 118 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 ACTG1P63261 375 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 SLC35A1P78382 337 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 RBMS2Q15434 407 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 C1orf100Q5SVJ3 147 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 WDFY1Q8IWB7 410 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 OR2AJ1Q8NGZ0 328 aa17.08■□□□□ 0.33
PRKCSH-209ENST00000589838 OR6X1Q8NH79 312 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms