RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 DACT3Q96B18 629 aaPredicted RBP12.6□□□□□ -0.39
SF3A2-204ENST00000589118 NMD3Q96D46 503 aaKnown RBP12.6□□□□□ -0.39
SF3A2-204ENST00000589118 CMBLQ96DG6 245 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 SPDL1Q96EA4 605 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 C4orf45Q96LM5 186 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 SAMD8Q96LT4 415 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 PRSS27Q9BQR3 290 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 NANOGQ9H9S0 305 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 CCDC167Q9P0B6 97 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 RNF114Q9Y508 228 aa12.6□□□□□ -0.39
SF3A2-204ENST00000589118 TRBV5-3A0A0A0MS03 114 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 H0YL77 283 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 FMO6PO60774 539 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 MELTFP08582 738 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 RPS2P15880 293 aaKnown RBP12.59□□□□□ -0.39
SF3A2-204ENST00000589118 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
SF3A2-204ENST00000589118 PCBP3P57721 371 aaKnown RBP12.59□□□□□ -0.39
SF3A2-204ENST00000589118 FGF12P61328 243 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 GNB2P62879 340 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 LAPTM4AQ15012 233 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 NRN1LQ496H8 165 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 ARMC4Q5T2S8 1044 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 SWT1Q5T5J6 900 aaKnown RBP12.59□□□□□ -0.39
SF3A2-204ENST00000589118 ZNF613Q6PF04 617 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 BTNL3Q6UXE8 466 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 LRRN1Q6UXK5 716 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 KLBQ86Z14 1044 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 LINC01006Q8NI28 216 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 OR2V2Q96R30 315 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 SEPHS2Q99611 448 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 MRGBPQ9NV56 204 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 ZNF229Q9UJW7 825 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
SF3A2-204ENST00000589118 KIR2DS1A0A191URI9 304 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 A0A1B0GUS0 222 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 A0A1W2PRG6 482 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 PRORSD1PA6NEY8 169 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 G3V4G9 280 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 M0QX08 132 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 TIMM23O14925 209 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 SFTPBP07988 381 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 SLC6A2P23975 617 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 LIPAP38571 399 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 MMP16P51512 607 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 ZNF133P52736 654 aaPredicted RBP12.58□□□□□ -0.4
SF3A2-204ENST00000589118 CD47Q08722 323 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 TAF9Q16594 264 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 FBLN7Q53RD9 439 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 ZNF362Q5T0B9 420 aaPredicted RBP12.58□□□□□ -0.4
SF3A2-204ENST00000589118 C1orf94Q6P1W5 598 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 SLC7A6Q92536 515 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 ZNF607Q96SK3 696 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 NUDT16L1Q9BRJ7 211 aaKnown RBP12.58□□□□□ -0.4
SF3A2-204ENST00000589118 TMEM246Q9BRR3 403 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 SLC19A3Q9BZV2 496 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 GCM1Q9NP62 436 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 C20orf141Q9NUB4 165 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 LRCH1Q9Y2L9 728 aa12.58□□□□□ -0.4
SF3A2-204ENST00000589118 KMT2CQ8NEZ4 4911 aaKnown RBP12.57□□□□□ -0.4
SF3A2-204ENST00000589118 SLC22A31A6NKX4 558 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 SERPINB7O75635 380 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 NDUFA7O95182 113 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 TNFRSF1AP19438 455 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 PPIBP23284 216 aaKnown RBP12.57□□□□□ -0.4
SF3A2-204ENST00000589118 TOP3AQ13472 1001 aaPredicted RBP12.57□□□□□ -0.4
SF3A2-204ENST00000589118 ENDOGQ14249 297 aaKnown RBP12.57□□□□□ -0.4
SF3A2-204ENST00000589118 AGKQ53H12 422 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 FAM27BQ5VT28 67 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 SLC27A4Q6P1M0 643 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 PTOV1Q86YD1 416 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 NKAIN4Q8IVV8 208 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 DPP10Q8N608 796 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 FITM2Q8N6M3 262 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 ATG16L2Q8NAA4 619 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 OR10AD1Q8NGE0 317 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 PCGF1Q9BSM1 259 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 TCF7L1Q9HCS4 588 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 EMC7Q9NPA0 242 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 INIPQ9NRY2 104 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 IL20RAQ9UHF4 553 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 RYR3Q15413 4870 aa12.57□□□□□ -0.4
SF3A2-204ENST00000589118 A0A0G2JND7 137 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 A0A1W2PPL8 197 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 TRAPPC13A5PLN9 417 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 SHOX2O60902 331 aaPredicted RBP12.56□□□□□ -0.4
SF3A2-204ENST00000589118 TROVE2P10155 538 aaKnown RBP eCLIP12.56□□□□□ -0.4
SF3A2-204ENST00000589118 GPX2P18283 190 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 TNFRSF1BP20333 461 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 TNFSF4P23510 183 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 PMELP40967 661 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 ARHGDIAP52565 204 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 PRSS12P56730 875 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 PROK1P58294 105 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 SELPLGQ14242 412 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 HLXQ14774 488 aaPredicted RBP12.56□□□□□ -0.4
SF3A2-204ENST00000589118 CGB2Q6NT52 195 aa12.56□□□□□ -0.4
SF3A2-204ENST00000589118 DLEU7Q6UYE1 221 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms