RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 A6NIZ1 184 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 AHCYL1O43865 530 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 MSR1P21757 451 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
VMP1-209ENST00000588915 MTNR1AP48039 350 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 RAP1BP61224 184 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 BTG1P62324 171 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 RAP1AP62834 184 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 PAX8Q06710 450 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 ESCO2Q56NI9 601 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 SPRNQ5BIV9 151 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 KLF17Q5JT82 389 aaPredicted RBP11.78□□□□□ -0.52
VMP1-209ENST00000588915 METTL21CQ5VZV1 264 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 ZNF774Q6NX45 483 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 ERICH5Q6P6B1 374 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 C9orf139Q6ZV77 190 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 CALHM3Q86XJ0 350 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
VMP1-209ENST00000588915 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 PTP4A1Q93096 173 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 BPIFA2Q96DR5 249 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 MAGEB18Q96M61 343 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 ECSITQ9BQ95 431 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
VMP1-209ENST00000588915 PPP1R3CQ9UQK1 317 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 LRCH1Q9Y2L9 728 aa11.78□□□□□ -0.52
VMP1-209ENST00000588915 J3QW42 95 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 FSTL3O95633 263 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 ABHD16AO95870 558 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 CTXN1P60606 82 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 SCRN3Q0VDG4 424 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 ENDOGQ14249 297 aaKnown RBP11.77□□□□□ -0.53
VMP1-209ENST00000588915 OCLNQ16625 522 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 SLC27A4Q6P1M0 643 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 TREML4Q6UXN2 200 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 LRRC75AQ8NAA5 344 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 OR8J3Q8NGG0 315 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 HAVCR1Q96D42 359 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 C1orf147Q96MC9 270 aaPredicted RBP11.77□□□□□ -0.53
VMP1-209ENST00000588915 SIGLEC11Q96RL6 698 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 SIKE1Q9BRV8 207 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 MS4A7Q9GZW8 240 aaPredicted RBP11.77□□□□□ -0.53
VMP1-209ENST00000588915 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 MRGBPQ9NV56 204 aa11.77□□□□□ -0.53
VMP1-209ENST00000588915 WNT2P09544 360 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 IFI30P13284 250 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 TNFRSF1BP20333 461 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 SLC9A3P48764 834 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 TOP3AQ13472 1001 aaPredicted RBP11.76□□□□□ -0.53
VMP1-209ENST00000588915 ZMYND11Q15326 602 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 COQ5Q5HYK3 327 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 LRRN1Q6UXK5 716 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 ZNF771Q7L3S4 317 aaPredicted RBP11.76□□□□□ -0.53
VMP1-209ENST00000588915 RNF113BQ8IZP6 322 aaKnown RBP11.76□□□□□ -0.53
VMP1-209ENST00000588915 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
VMP1-209ENST00000588915 FAM156AQ8NDB6 213 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 OR2Z1Q8NG97 314 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 OR52E2Q8NGJ4 325 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 CMBLQ96DG6 245 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 THOC1Q96FV9 657 aaKnown RBP11.76□□□□□ -0.53
VMP1-209ENST00000588915 ATP6V1G3Q96LB4 118 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
VMP1-209ENST00000588915 DCAF16Q9NXF7 216 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 OR5V1Q9UGF6 321 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
VMP1-209ENST00000588915 A0A1B0GUS0 222 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 A0A1W2PPL8 197 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 TMEM178BH3BS89 294 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 RAC2P15153 192 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 CD80P33681 288 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 OR1E2P47887 323 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 BPIFB3P59826 476 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 SEC61A1P61619 476 aaKnown RBP11.75□□□□□ -0.53
VMP1-209ENST00000588915 GUCY1A3Q02108 690 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 PAX2Q02962 417 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 PRKCDQ05655 676 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 SLC9A3R2Q15599 337 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
VMP1-209ENST00000588915 RABL3Q5HYI8 236 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 LEG1Q6P5S2 330 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 BTNL3Q6UXE8 466 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 Q6ZR03 302 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 CLDN22Q8N7P3 220 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 PCYOX1LQ8NBM8 494 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 ITLN1Q8WWA0 313 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 PRRC1Q96M27 445 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 ZNF583Q96ND8 569 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 GCM1Q9NP62 436 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 INTS9Q9NV88 658 aaKnown RBP11.75□□□□□ -0.53
VMP1-209ENST00000588915 MIOXQ9UGB7 285 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 A4GNTQ9UNA3 340 aa11.75□□□□□ -0.53
VMP1-209ENST00000588915 CEACAM18A8MTB9 384 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 FBP2O00757 339 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 SGCEO43556 437 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 SHOX2O60902 331 aaPredicted RBP11.74□□□□□ -0.53
VMP1-209ENST00000588915 KDELR2P33947 212 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 SELENOWP63302 87 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 FHL1Q13642 323 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 ZNF181Q2M3W8 571 aa11.74□□□□□ -0.53
VMP1-209ENST00000588915 CYBRD1Q53TN4 286 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms