RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TEKQ02763 1124 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 SCRN3Q0VDG4 424 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 SWI5Q1ZZU3 235 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 TBC1D28Q2M2D7 210 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 HIST2H3PS2Q5TEC6 136 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 HIST2H3AQ71DI3 136 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-207ENST00000588542 ALDH16A1Q8IZ83 802 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 LRRC75A-AS1Q8N1F1 130 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 OR51L1Q8NGJ5 315 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 OR1J2Q8NGS2 313 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 PTP4A1Q93096 173 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 GSX2Q9BZM3 304 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 CXorf56Q9H5V9 222 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 MED20Q9H944 212 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 CDH20Q9HBT6 801 aa17.43■□□□□ 0.38
DDX39A-207ENST00000588542 CHD3Q12873 2000 aaKnown RBP17.42■□□□□ 0.38
DDX39A-207ENST00000588542 FAM183AA6NL82 134 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 HMGN1P05114 100 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 OR4A8P0C604 315 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 EPHA2P29317 976 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 CDKN1AP38936 164 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 PTH2RP49190 550 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 GALK2Q01415 458 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 PTGES3Q15185 160 aaKnown RBP17.42■□□□□ 0.38
DDX39A-207ENST00000588542 CCDC92Q53HC0 331 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-207ENST00000588542 LYPD4Q6UWN0 246 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 VASH1Q7L8A9 365 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-207ENST00000588542 KRTAP1-3Q8IUG1 177 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 PROKR2Q8NFJ6 384 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 PERPQ96FX8 193 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 CIB1Q99828 191 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 OSBPL10Q9BXB5 764 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 SPEF1Q9Y4P9 236 aa17.42■□□□□ 0.38
DDX39A-207ENST00000588542 TMEM129A0AVI4 362 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 ANKRD65E5RJM6 399 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 RER1O15258 196 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 SGCEO43556 437 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 COX5BP10606 129 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 PCSK6P29122 969 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 GLRXP35754 106 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 GGT2P36268 569 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 SERPINF1P36955 418 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 WNT5AP41221 380 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 LINC01590Q5TEZ4 76 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 CORO6Q6QEF8 472 aa17.41■□□□□ 0.38
DDX39A-207ENST00000588542 HIVEP1P15822 2718 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 C5orf49A4QMS7 147 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 OR6C6A6NF89 314 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 TVP23AA6NH52 213 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 SYNGR3O43761 229 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 DOK2O60496 412 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 HLA-DQA2P01906 255 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 FAM157BP0CG42 384 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 PSKH1P11801 424 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 IGFBP5P24593 272 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 GDI2P50395 445 aaKnown RBP17.4■□□□□ 0.38
DDX39A-207ENST00000588542 UCP2P55851 309 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 EFNB3Q15768 340 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 SLC18B1Q6NT16 456 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 SPNS3Q6ZMD2 512 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 LINC00346Q8IVM7 164 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 OR10H5Q8NGA6 315 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 CACNG6Q9BXT2 260 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 HINT3Q9NQE9 182 aaKnown RBP17.4■□□□□ 0.38
DDX39A-207ENST00000588542 PLEK2Q9NYT0 353 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 CYB5R1Q9UHQ9 305 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 POLR1DQ9Y2S0 133 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 CMAHPQ9Y471 501 aa17.4■□□□□ 0.38
DDX39A-207ENST00000588542 ZAR1LA6NP61 321 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 B9A039 149 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 ICMTO60725 284 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 NDUFS7O75251 213 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 CCNOP22674 350 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 HTR5AP47898 357 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 CFAP77Q6ZQR2 320 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 ZNF101Q8IZC7 436 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 PQLC1Q8N2U9 271 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 ZNF511Q8NB15 262 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 GJC3Q8NFK1 279 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 RBM4BQ9BQ04 359 aaKnown RBP17.39■□□□□ 0.37
DDX39A-207ENST00000588542 OR51B6Q9H340 312 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 PLK3Q9H4B4 646 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 WDR76Q9H967 626 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 TVP23BQ9NYZ1 205 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 NDRG4Q9ULP0 352 aaKnown RBP17.39■□□□□ 0.37
DDX39A-207ENST00000588542 COMMD3-BMI1R4GMX3 469 aa17.39■□□□□ 0.37
DDX39A-207ENST00000588542 PRR23D1E9PI22 279 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-207ENST00000588542 ALPLP05186 524 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 PRR23D2P0DMB1 279 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-207ENST00000588542 FMO3P31513 532 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 POLR2IP36954 125 aaKnown RBP17.38■□□□□ 0.37
DDX39A-207ENST00000588542 RPS27P42677 84 aaKnown RBP17.38■□□□□ 0.37
DDX39A-207ENST00000588542 ERVS71-1P61550 626 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 RAB35Q15286 201 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 SLX4IPQ5VYV7 408 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 PLBD1Q6P4A8 553 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 CPOQ8IVL8 374 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 OR1F12Q8NHA8 337 aa17.38■□□□□ 0.37
DDX39A-207ENST00000588542 SLC7A6Q92536 515 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms