RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 METTL15A6NJ78 407 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 RER1O15258 196 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 LRRTM2O43300 516 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 TMCC2O75069 709 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 CST2P09228 141 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 PATE4P0C8F1 98 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 CTSSP25774 331 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 PSMB10P40306 273 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 CA7P43166 264 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 HIST1H3AP68431 136 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 ROM1Q03395 351 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 MLLT11Q13015 90 aaPredicted RBP9.91□□□□□ -0.82
VMP1-207ENST00000588131 MRPL49Q13405 166 aaKnown RBP9.91□□□□□ -0.82
VMP1-207ENST00000588131 AQP6Q13520 282 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 SSX1Q16384 188 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 EIF2S3LQ2VIR3 472 aaKnown RBP9.91□□□□□ -0.82
VMP1-207ENST00000588131 HIST2H3PS2Q5TEC6 136 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 FOXB2Q5VYV0 432 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 HIST2H3AQ71DI3 136 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 ZNF627Q7L945 461 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 ABHD12BQ7Z5M8 362 aaPredicted RBP9.91□□□□□ -0.82
VMP1-207ENST00000588131 YIPF7Q8N8F6 280 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 OR1K1Q8NGR3 316 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 OR2AJ1Q8NGZ0 328 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 ASB17Q8WXJ9 295 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 SLAMF6Q96DU3 332 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 YIPF6Q96EC8 236 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 PELI1Q96FA3 418 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 DMRTA2Q96SC8 542 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 SFXN3Q9BWM7 321 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 C1orf198Q9H425 327 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 ELOVL3Q9HB03 270 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 PNRC2Q9NPJ4 139 aaKnown RBP9.91□□□□□ -0.82
VMP1-207ENST00000588131 BABAM2Q9NXR7 383 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 ZNF224Q9NZL3 707 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 OSGIN2Q9Y236 505 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 SVILO95425 2214 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 FREM1Q5H8C1 2179 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 BOD1L1Q8NFC6 3051 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 PNMA8CA0A1B0GUJ8 204 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 ZNF503-AS2A6NEH8 195 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 E9PLN8 166 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 H3BSA7 217 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 RPP14O95059 124 aaKnown RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 CNOT4O95628 575 aaKnown RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 KRT8P05787 483 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 CD8BP10966 210 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 ZNF32P17041 273 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 COX5AP20674 150 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 OPRL1P41146 370 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 ACSM1Q08AH1 577 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 NRN1LQ496H8 165 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 CCDC92Q53HC0 331 aaPredicted RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 LIPNQ5VXI9 398 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 OR7E24Q6IFN5 339 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 KCTD18Q6PI47 426 aaPredicted RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 Q6ZT83 130 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 SLC16A14Q7RTX9 510 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 FAM220AQ7Z4H9 259 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 KRT77Q7Z794 578 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 ZNF679Q8IYX0 411 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 GABRG1Q8N1C3 465 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 RNF133Q8WVZ7 376 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 HSD17B8Q92506 261 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 BCL2L2Q92843 193 aaPredicted RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 MRPL48Q96GC5 212 aaKnown RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 BBC3Q96PG8 261 aaPredicted RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 VKORC1Q9BQB6 163 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 NAA50Q9GZZ1 169 aaKnown RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 RBM38Q9H0Z9 239 aaKnown RBP9.9□□□□□ -0.82
VMP1-207ENST00000588131 NOX3Q9HBY0 568 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 ISYNA1Q9NPH2 558 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 TRIM36Q9NQ86 728 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 BATF3Q9NR55 127 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 CENPMQ9NSP4 180 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 ST6GALNAC2Q9UJ37 374 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 FBXL3Q9UKT7 428 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 MEMO1Q9Y316 297 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 LRP12Q9Y561 859 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 CEPT1Q9Y6K0 416 aa9.9□□□□□ -0.82
VMP1-207ENST00000588131 HSPB2A8KAH6 182 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 CCRL2O00421 344 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 RAD51DO75771 328 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 SULT1C4O75897 302 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 LYZL6O75951 148 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 FARS2O95363 451 aaKnown RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 MMP7P09237 267 aaPredicted RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 H2BFMP0C1H6 154 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 CD36P16671 472 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 CPEP16870 476 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 RGS6P49758 472 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 GBX2P52951 348 aaPredicted RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 CASP6P55212 293 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 SH3BGRP55822 239 aaPredicted RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 NANOS3P60323 173 aaKnown RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 TUBA1BP68363 451 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 TPBGQ13641 420 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 TSC22D1Q15714 1073 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 HSPB2Q16082 182 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 HIKESHIQ53FT3 197 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms