RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 LCE2DQ5TA82 110 aaPredicted RBP12.17□□□□□ -0.46
SDF2-202ENST00000585428 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 ARL9Q6T311 187 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 SPICQ8N5J4 248 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 HAVCR1Q96D42 359 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 SIGLEC11Q96RL6 698 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 WACQ9BTA9 647 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 UNKLQ9H9P5 680 aaKnown RBP12.17□□□□□ -0.46
SDF2-202ENST00000585428 MAN2C1Q9NTJ4 1040 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 IL19Q9UHD0 177 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 TIMM8AO60220 97 aaPredicted RBP12.16□□□□□ -0.46
SDF2-202ENST00000585428 WNT2P09544 360 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 PPIAL4GP0DN37 164 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 TNFRSF1AP19438 455 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 CD80P33681 288 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 GUCA1AP43080 201 aaPredicted RBP12.16□□□□□ -0.46
SDF2-202ENST00000585428 BTG1P62324 171 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 IL13RA1P78552 427 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 SLC9A3R2Q15599 337 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 CMBLQ96DG6 245 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 BPIFA2Q96DR5 249 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 ZNF583Q96ND8 569 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 POFUT1Q9H488 388 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
SDF2-202ENST00000585428 C12orf71A8MTZ7 269 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 TMEM178BH3BS89 294 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 MSR1P21757 451 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 FUT4P22083 530 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 TNFSF4P23510 183 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 CPT2P23786 658 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 CTXN1P60606 82 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 CYLC2Q14093 348 aaPredicted RBP12.15□□□□□ -0.46
SDF2-202ENST00000585428 PDLIM3Q53GG5 364 aaPredicted RBP12.15□□□□□ -0.46
SDF2-202ENST00000585428 RABL3Q5HYI8 236 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 METTL21CQ5VZV1 264 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 C9orf139Q6ZV77 190 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 PTP4A1Q93096 173 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 SLC25A28Q96A46 364 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 SH3GL1Q99961 368 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 MRI1Q9BV20 369 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 SLITRK2Q9H156 845 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 POLE4Q9NR33 117 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 NDRG4Q9ULP0 352 aaKnown RBP12.15□□□□□ -0.46
SDF2-202ENST00000585428 A4GNTQ9UNA3 340 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
SDF2-202ENST00000585428 PIP5K1CO60331 668 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 ABHD16AO95870 558 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 GSTM3P21266 225 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 DEFA6Q01524 100 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 ST3GAL3Q11203 375 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 TOP3AQ13472 1001 aaPredicted RBP12.14□□□□□ -0.47
SDF2-202ENST00000585428 FAM205BPQ63HN1 556 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 LEG1Q6P5S2 330 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 NPEPL1Q8NDH3 523 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 OR8J3Q8NGG0 315 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 OR52E2Q8NGJ4 325 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
SDF2-202ENST00000585428 DACT3Q96B18 629 aaPredicted RBP12.14□□□□□ -0.47
SDF2-202ENST00000585428 THOC1Q96FV9 657 aaKnown RBP12.14□□□□□ -0.47
SDF2-202ENST00000585428 ECSITQ9BQ95 431 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
SDF2-202ENST00000585428 TMEM165Q9HC07 324 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 GCM1Q9NP62 436 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 IL20RAQ9UHF4 553 aa12.14□□□□□ -0.47
SDF2-202ENST00000585428 SOX21Q9Y651 276 aaPredicted RBP12.14□□□□□ -0.47
SDF2-202ENST00000585428 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 A0A1W2PPL8 197 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 A6NIZ1 184 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 FXYD1O00168 92 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 SURF4O15260 269 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 PLATP00750 562 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 NPPAP01160 153 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 IFNA14P01570 189 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 IFI30P13284 250 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 KDELR2P33947 212 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
SDF2-202ENST00000585428 RAP1BP61224 184 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 RAP1AP62834 184 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 SELENOWP63302 87 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 PRKCDQ05655 676 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 OCLNQ16625 522 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 ANKDD1AQ495B1 522 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 ESCO2Q56NI9 601 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 C16orf87Q6PH81 154 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 IGFN1Q86VF2 1251 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 OR51A7Q8NH64 312 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 C10orf82Q8WW14 230 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 ATP6V1G3Q96LB4 118 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
SDF2-202ENST00000585428 CEACAM18A8MTB9 384 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 IFNL4K9M1U5 179 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 AHCYL1O43865 530 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 FSTL3O95633 263 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 IGHV4-38-2P0DP08 117 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 RAC2P15153 192 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 MTNR1AP48039 350 aa12.12□□□□□ -0.47
SDF2-202ENST00000585428 CYBRD1Q53TN4 286 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms