RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 NGFP01138 241 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 IFI30P13284 250 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 TNFRSF1AP19438 455 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 TNFRSF1BP20333 461 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 GSTM3P21266 225 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 MSR1P21757 451 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 SLC9A3P48764 834 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 TNFAIP6P98066 277 aaPredicted RBP12.69□□□□□ -0.38
VAPA-209ENST00000585042 TMEM155Q4W5P6 130 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 TMEM255AQ5JRV8 349 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 RFPL4BQ6ZWI9 263 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 SPICQ8N5J4 248 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 POU5F2Q8N7G0 328 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 ZDHHC22Q8N966 263 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 LRRC75AQ8NAA5 344 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 LZICQ8WZA0 190 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 RCN3Q96D15 328 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 PRRC1Q96M27 445 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 SLC6A7Q99884 636 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 HOPXQ9BPY8 73 aaPredicted RBP12.69□□□□□ -0.38
VAPA-209ENST00000585042 ZMAT3Q9HA38 289 aaKnown RBP12.69□□□□□ -0.38
VAPA-209ENST00000585042 DDX28Q9NUL7 540 aaKnown RBP12.69□□□□□ -0.38
VAPA-209ENST00000585042 A4GNTQ9UNA3 340 aa12.69□□□□□ -0.38
VAPA-209ENST00000585042 ISPDA4D126 451 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 IFNL4K9M1U5 179 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 SURF4O15260 269 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 SHOX2O60902 331 aaPredicted RBP12.68□□□□□ -0.38
VAPA-209ENST00000585042 DCTN3O75935 186 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 IGHV2-70P01814 119 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 KITLGP21583 273 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 PRDX6P30041 224 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 UBA52P62987 128 aaKnown RBP12.68□□□□□ -0.38
VAPA-209ENST00000585042 LCN2P80188 198 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 PRKCDQ05655 676 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 FOXL1Q12952 345 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 PSG7Q13046 419 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 ENDOGQ14249 297 aaKnown RBP12.68□□□□□ -0.38
VAPA-209ENST00000585042 ZNF774Q6NX45 483 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 RBMS3Q6XE24 437 aaKnown RBP12.68□□□□□ -0.38
VAPA-209ENST00000585042 OAFQ86UD1 273 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
VAPA-209ENST00000585042 KLHL36Q8N4N3 616 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 ZNF283Q8N7M2 679 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 PATZ1Q9HBE1 687 aaKnown RBP12.68□□□□□ -0.38
VAPA-209ENST00000585042 ESM1Q9NQ30 184 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 POLE4Q9NR33 117 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 IL19Q9UHD0 177 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 TANC2Q9HCD6 1990 aa12.68□□□□□ -0.38
VAPA-209ENST00000585042 FAM220BPB1ANY3 271 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 J3QW42 95 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 TIMM8AO60220 97 aaPredicted RBP12.67□□□□□ -0.38
VAPA-209ENST00000585042 ABHD16AO95870 558 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 SBK2P0C263 348 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 ZFP36P26651 326 aaKnown RBP12.67□□□□□ -0.38
VAPA-209ENST00000585042 SLC6A9P48067 706 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 SCRN3Q0VDG4 424 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 TOP3AQ13472 1001 aaPredicted RBP12.67□□□□□ -0.38
VAPA-209ENST00000585042 FHL1Q13642 323 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 TRAM2Q15035 370 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 AWAT1Q58HT5 328 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 HACD2Q6Y1H2 254 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 PIGWQ7Z7B1 504 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 OR2T12Q8NG77 320 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 HAVCR1Q96D42 359 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 MYLK2Q9H1R3 596 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 MSL2Q9HCI7 577 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 PLEK2Q9NYT0 353 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 UBAP1Q9NZ09 502 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 PURGQ9UJV8 347 aaKnown RBP12.67□□□□□ -0.38
VAPA-209ENST00000585042 NUP50Q9UKX7 468 aa12.67□□□□□ -0.38
VAPA-209ENST00000585042 A0A1W2PPL8 197 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 ELOVL7A1L3X0 281 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 A8MXK9 166 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 EFCAB9A8MZ26 197 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 PIP5K1CO60331 668 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 HKR1P10072 659 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 NUDT2P50583 147 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 LRRC23Q53EV4 343 aaPredicted RBP12.66□□□□□ -0.38
VAPA-209ENST00000585042 SLC27A4Q6P1M0 643 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 SHISA2Q6UWI4 295 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 TMPRSS11FQ6ZWK6 438 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 DOK3Q7L591 496 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 MICU2Q8IYU8 434 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 OFCC1Q8IZS5 231 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 DEFB108BQ8NET1 73 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 OR51A7Q8NH64 312 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 GEMIN6Q8WXD5 167 aaKnown RBP12.66□□□□□ -0.38
VAPA-209ENST00000585042 ACOT11Q8WXI4 607 aaPredicted RBP12.66□□□□□ -0.38
VAPA-209ENST00000585042 PTP4A1Q93096 173 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 TPD52L3Q96J77 140 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 FNDC11Q9BVV2 318 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 NDEL1Q9GZM8 345 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 GRHPRQ9UBQ7 328 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 EGFL7Q9UHF1 273 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 AUP1Q9Y679 476 aa12.66□□□□□ -0.38
VAPA-209ENST00000585042 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.38
VAPA-209ENST00000585042 SGCEO43556 437 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms