RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ARL9Q6T311 187 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 TRPM8Q7Z2W7 1104 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.48■□□□□ 0.39
SS18-224ENST00000584083 LINC00471Q8N535 108 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 OR9Q2Q8NGE9 314 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 OR4K13Q8NH42 304 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 C4orf45Q96LM5 186 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 TSSK2Q96PF2 358 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 C1orf21Q9H246 121 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 ELOVL3Q9HB03 270 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 SRA1Q9HD15 236 aaKnown RBP17.48■□□□□ 0.39
SS18-224ENST00000584083 POLR1DQ9Y2S0 133 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 JMJD1CQ15652 2540 aa17.48■□□□□ 0.39
SS18-224ENST00000584083 C17orf100A8MU93 164 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 ARPC3O15145 178 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 CCNB2O95067 398 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 IGHV3-13P01766 116 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 COX5BP10606 129 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 HIST1H1CP16403 213 aaKnown RBP17.47■□□□□ 0.39
SS18-224ENST00000584083 ZNF23P17027 643 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 MAGEA2P43356 314 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 ARHGDIAP52565 204 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 PPP1CBP62140 327 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 LSM6P62312 80 aaKnown RBP17.47■□□□□ 0.39
SS18-224ENST00000584083 PPP1R8Q12972 351 aaKnown RBP17.47■□□□□ 0.39
SS18-224ENST00000584083 ELFN2Q5R3F8 820 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 ZNF620Q6ZNG0 422 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 RFPL4BQ6ZWI9 263 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 C1orf174Q8IYL3 243 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 SLC25A40Q8TBP6 338 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 RDH5Q92781 318 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 POP5Q969H6 163 aaKnown RBP17.47■□□□□ 0.39
SS18-224ENST00000584083 ASB9Q96DX5 294 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 MARS2Q96GW9 593 aaKnown RBP17.47■□□□□ 0.39
SS18-224ENST00000584083 NMNAT3Q96T66 252 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 TRIM15Q9C019 465 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 OR2J1Q9GZK6 312 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 PLEK2Q9NYT0 353 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 ASH2LQ9UBL3 628 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 MALRD1Q5VYJ5 2156 aa17.47■□□□□ 0.39
SS18-224ENST00000584083 LRP5LA4QPB2 252 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 IDH3BO43837 385 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 ABHD16AO95870 558 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 GPANK1O95872 356 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 NGFP01138 241 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 ZNF16P17020 682 aaPredicted RBP17.46■□□□□ 0.39
SS18-224ENST00000584083 COL8A2P25067 703 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 MAGEB1P43366 347 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 RIN1Q13671 783 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 CLEC12AQ5QGZ9 265 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 SLC35F1Q5T1Q4 408 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 OR2T5Q6IEZ7 315 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 VASH1Q7L8A9 365 aaPredicted RBP17.46■□□□□ 0.39
SS18-224ENST00000584083 OR52L1Q8NGH7 329 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 OR4C15Q8NGM1 316 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 OR2T29Q8NH02 315 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 BTBD10Q9BSF8 475 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 EGLN3Q9H6Z9 239 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 REEP1Q9H902 201 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 B9D1Q9UPM9 204 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 SAMHD1Q9Y3Z3 626 aaKnown RBP17.46■□□□□ 0.39
SS18-224ENST00000584083 U3KQV3 271 aa17.46■□□□□ 0.39
SS18-224ENST00000584083 DCTN6O00399 190 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 TPD52L2O43399 206 aaKnown RBP17.45■□□□□ 0.38
SS18-224ENST00000584083 NCR1O76036 304 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 MPV17P39210 176 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 CHN2P52757 468 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 CCL8P80075 99 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 KCNMB1Q16558 191 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 PCGF3Q3KNV8 242 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 RPL13AP3Q6NVV1 102 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 PGM2L1Q6PCE3 622 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 OR6V1Q8N148 313 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 AQP11Q8NBQ7 271 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 OR52E2Q8NGJ4 325 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 KLF14Q8TD94 323 aaPredicted RBP17.45■□□□□ 0.38
SS18-224ENST00000584083 IPCEF1Q8WWN9 437 aaPredicted RBP17.45■□□□□ 0.38
SS18-224ENST00000584083 SNX18Q96RF0 628 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 CHODLQ9H9P2 273 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 RPRD1BQ9NQG5 326 aaKnown RBP17.45■□□□□ 0.38
SS18-224ENST00000584083 GRIP1Q9Y3R0 1128 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 CDH10Q9Y6N8 788 aa17.45■□□□□ 0.38
SS18-224ENST00000584083 IGLV1-36A0A0B4J1U3 117 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 LOC100289279A0A1B0GTE1 492 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 PLSCR5A0PG75 271 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 GYG2O15488 501 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 ICMTO60725 284 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 UBOX5O94941 541 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 GASTP01350 101 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 ACHEP22303 614 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 ZNF81P51508 661 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 TSTQ16762 297 aaKnown RBP17.44■□□□□ 0.38
SS18-224ENST00000584083 MEP1BQ16820 701 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 MBNL2Q5VZF2 373 aaKnown RBP17.44■□□□□ 0.38
SS18-224ENST00000584083 PRIMA1Q86XR5 153 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 HIPK1Q86Z02 1210 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 SDR9C7Q8NEX9 313 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 GTF3AQ92664 365 aaKnown RBP17.44■□□□□ 0.38
SS18-224ENST00000584083 FN3KQ9H479 309 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 DECR2Q9NUI1 292 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms