RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 AGTRAPQ6RW13 159 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 PLET1Q6UQ28 207 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM107Q6UX40 140 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM131AQ6UXB0 335 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 CXCL17Q6UXB2 119 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 CASP12Q6UXS9 341 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 LINGO4Q6UY18 593 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 MBOAT1Q6ZNC8 495 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 Q6ZRP5 223 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 PRSS42Q7Z5A4 293 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 GALNT10Q86SR1 603 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 LAX1Q8IWV1 398 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC34A3Q8N130 599 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 YIPF7Q8N8F6 280 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 AQP11Q8NBQ7 271 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 CLEC1AQ8NC01 280 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 OR9Q2Q8NGE9 314 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 OR5AP2Q8NGF4 316 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 OR52I1Q8NGK6 324 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 SUN5Q8TC36 379 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 C16orf78Q8WTQ4 265 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 ACOT12Q8WYK0 555 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 OR5P2Q8WZ92 322 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 AP3S1Q92572 193 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 DYRK2Q92630 601 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 THRSPQ92748 146 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 MAL2Q969L2 176 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 DTD2Q96FN9 168 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 DIRAS2Q96HU8 199 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 PPP1R16AQ96I34 528 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 SGK494Q96LW2 274 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 KCTD7Q96MP8 289 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 GPR137Q96N19 417 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 CASD1Q96PB1 797 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 VPS35Q96QK1 796 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 OR4K3Q96R72 315 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC35A5Q9BS91 424 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM43Q9BTV4 400 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 WRAP53Q9BUR4 548 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 DPAGT1Q9H3H5 408 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 C11orf49Q9H6J7 331 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 RANBP3Q9H6Z4 567 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 ANKRA2Q9H9E1 313 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 FOLH1BQ9HBA9 442 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 SGK2Q9HBY8 427 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 ABCB9Q9NP78 766 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 PLSCR3Q9NRY6 295 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 MARCH5Q9NX47 278 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 TAS2R7Q9NYW3 318 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 CLEC2DQ9UHP7 191 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 LAMP5Q9UJQ1 280 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 ELF5Q9UKW6 265 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 EXOSC1Q9Y3B2 195 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 CDH10Q9Y6N8 788 aa3.34□□□□□ -1.87
SMCHD1-208ENST00000583344 ALPK3Q96L96 1907 aa3.34□□□□□ -1.88
SMCHD1-208ENST00000583344 SCN10AQ9Y5Y9 1956 aa3.34□□□□□ -1.88
SMCHD1-208ENST00000583344 SCN8AQ9UQD0 1980 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 A0A0X1KG70 313 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 A0A1B0GTQ1 180 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 C2orf92A0A1B0GVN3 265 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 C7orf66A4D0T2 115 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 MSGN1A6NI15 193 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SNTNA6NMZ2 147 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 LEUTXA8MZ59 168 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 WASH3PC4AMC7 463 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 MYL12BO14950 172 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TEX28O15482 410 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 LYRM1O43325 122 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ORC5O43913 435 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 PRKYO43930 277 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 GMFGO60234 142 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC19A2O60779 497 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 NOS1APO75052 506 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ETHE1O95571 254 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 C6orf47O95873 294 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 IGSF6O95976 241 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 SOD1P00441 154 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 AK1P00568 194 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 OPN1MWP04001 364 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 CATP04040 527 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 HLA-DPB1P04440 258 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ASGR1P07306 291 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 TSPAN19P0C672 248 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 C1GALT1C1LP0DN25 315 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 OPN1MW2P0DN77 364 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 OPN1MW3P0DN78 364 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 PRKAR1AP10644 381 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 CYBAP13498 195 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 MYL12AP19105 171 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 GSTM3P21266 225 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ELAVL4P26378 380 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 PBLDP30039 288 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 IFNA8P32881 189 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 MMP12P39900 470 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ETV5P41161 510 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 CSKP41240 450 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 HTR2BP41595 481 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 ETV1P50549 477 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 XKP51811 444 aa3.33□□□□□ -1.88
SMCHD1-208ENST00000583344 MAPK12P53778 367 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms