RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TNFRSF19Q9NS68 423 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 TMEM106BQ9NUM4 274 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 OR5V1Q9UGF6 321 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 SNX13Q9Y5W8 968 aa10.36□□□□□ -0.75
TOP3A-215ENST00000583328 A0A0B4J2E0 115 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 MDFIC2A0A1B0GVS7 189 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 A0A1B0GX12 115 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 ARPC2O15144 300 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 HOXA3O43365 443 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-215ENST00000583328 RNF13O43567 381 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 DNAJC8O75937 253 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-215ENST00000583328 SERPINA1P01009 418 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 ADH4P08319 380 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 STOMP27105 288 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 CD80P33681 288 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 ZNF84P51523 738 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 RAG2P55895 527 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 CLRN1P58418 232 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 SELENOWP63302 87 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 TNFAIP6P98066 277 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-215ENST00000583328 TMEM155Q4W5P6 130 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 ESCO2Q56NI9 601 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 PABPC1L2AQ5JQF8 200 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 MBNL2Q5VZF2 373 aaKnown RBP10.35□□□□□ -0.75
TOP3A-215ENST00000583328 BTNL3Q6UXE8 466 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 CCDC121Q6ZUS5 278 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 C9orf139Q6ZV77 190 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 CBLL1Q75N03 491 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 RANBP3LQ86VV4 465 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-215ENST00000583328 LRRC28Q86X40 367 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-215ENST00000583328 C1QL4Q86Z23 238 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 KLF14Q8TD94 323 aaPredicted RBP10.35□□□□□ -0.75
TOP3A-215ENST00000583328 CITED1Q99966 193 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 TMEM43Q9BTV4 400 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 THTPAQ9BU02 230 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 SLC19A3Q9BZV2 496 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 OR2J1Q9GZK6 312 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 MSL2Q9HCI7 577 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 CCNB1IP1Q9NPC3 277 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 RPS6KA6Q9UK32 745 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 ZDHHC8Q9ULC8 765 aa10.35□□□□□ -0.75
TOP3A-215ENST00000583328 CLPSL1A2RUU4 121 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 C5orf49A4QMS7 147 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 A8MXK9 166 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 M0R3H8 397 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 FMO6PO60774 539 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 ALX3O95076 343 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 ZNF682O95780 498 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 CH25HO95992 272 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 IGHG1P01857 330 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 CD55P08174 381 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 MMP7P09237 267 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 PGA4P0DJD7 388 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 PGA3P0DJD8 388 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 MSX2P35548 267 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 RBMXP38159 391 aaKnown RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 WNT5AP41221 380 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 GDI2P50395 445 aaKnown RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 CDH12P55289 794 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 TRIM25Q14258 630 aaKnown RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 NRN1LQ496H8 165 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 ZMAT1Q5H9K5 638 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 TMEM255AQ5JRV8 349 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 FIP1L1Q6UN15 594 aaKnown RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 LRRN1Q6UXK5 716 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 RHOUQ7L0Q8 258 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 ZNF101Q8IZC7 436 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 MCHR2Q969V1 340 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 TPD52L3Q96J77 140 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 POM121L2Q96KW2 1035 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 NSMCE2Q96MF7 247 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 RBM4BQ9BQ04 359 aaKnown RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 PCDHAC1Q9H158 963 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 DCAF13Q9NV06 445 aaKnown RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 TAS2R5Q9NYW4 299 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 ACTR3BQ9P1U1 418 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 CGGBP1Q9UFW8 167 aaPredicted RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 IL20RAQ9UHF4 553 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 KLHL21Q9UJP4 597 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 SAMD4AQ9UPU9 718 aaKnown RBP10.34□□□□□ -0.75
TOP3A-215ENST00000583328 SH3GLB1Q9Y371 365 aa10.34□□□□□ -0.75
TOP3A-215ENST00000583328 F5H0A9 414 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-215ENST00000583328 TIMM8AO60220 97 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-215ENST00000583328 MGRN1O60291 552 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 PLATP00750 562 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 NGFP01138 241 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 HIST1H2ABP04908 130 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 TNFSF4P23510 183 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 PPP1CBP62140 327 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 BTG1P62324 171 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 DEFB112Q30KQ8 113 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 IFI44LQ53G44 452 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 FBLN7Q53RD9 439 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 MTX3Q5HYI7 312 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 PGM2L1Q6PCE3 622 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 HIST3H2AQ7L7L0 130 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 C1orf174Q8IYL3 243 aa10.33□□□□□ -0.76
TOP3A-215ENST00000583328 ZNF283Q8N7M2 679 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms