RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	GTF2H4	Q92759	462 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	CENPN	Q96H22	339 aa	Predicted RBP	3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	RAX2	Q96IS3	184 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF583	Q96ND8	569 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	MBOAT4	Q96T53	435 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	CGREF1	Q99674	301 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	NKX3-1	Q99801	234 aa	Predicted RBP	3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	CCT7	Q99832	543 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	KCTD14	Q9BQ13	255 aa	Predicted RBP	3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	CPPED1	Q9BRF8	314 aa	Predicted RBP	3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	ADI1	Q9BV57	179 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	EGLN1	Q9GZT9	426 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	PAIP1	Q9H074	479 aa	Known RBP	3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	NT5DC2	Q9H857	520 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	NANS	Q9NR45	359 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	PARPBP	Q9NWS1	579 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	VNN3	Q9NY84	501 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	SLC25A37	Q9NYZ2	338 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	SIGLEC8	Q9NYZ4	499 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	VAPA	Q9P0L0	249 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	PHF11	Q9UIL8	331 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	MYRF	Q9Y2G1	1151 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	OARD1	Q9Y530	152 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	PCDHGA11	Q9Y5H2	935 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	KPTN	Q9Y664	436 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772	COMMD10	Q9Y6G5	202 aa		3.87	□□□□□ -1.79
MSI2-216	ENST00000582772		E5RI56	91 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	FAM229A	H3BQW9	127 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	CCL24	O00175	119 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SNAP29	O95721	258 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	OXSR1	O95747	527 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	CHEK2	O96017	543 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	HMOX2	P30519	316 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	CAPG	P40121	348 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	CASP2	P42575	452 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	YAP1	P46937	504 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SMCP	P49901	116 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	NPY4R	P50391	375 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF41	P51814	821 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SH3BGR	P55822	239 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	NAA20	P61599	178 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	RPL38	P63173	70 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TUBA1B	P68363	451 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TUBA4A	P68366	448 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TNFRSF9	Q07011	255 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	ACSM1	Q08AH1	577 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	MERTK	Q12866	999 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	DYNC1I2	Q13409	638 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	RBBP5	Q15291	538 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	MOG	Q16653	247 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	PRICKLE4	Q2TBC4	344 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	ZIK1	Q3SY52	487 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TMEM176B	Q3YBM2	270 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	ATP6AP1L	Q52LC2	224 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	RUNDC3A	Q59EK9	446 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SGO1	Q5FBB7	561 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SPANXN4	Q5MJ08	99 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	GLYAT	Q6IB77	296 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	LAIR2	Q6ISS4	152 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SLC27A4	Q6P1M0	643 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	CASP12	Q6UXS9	341 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TMIGD1	Q6UXZ0	262 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TUBA1A	Q71U36	451 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF551	Q7Z340	670 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	VN1R5	Q7Z5H4	357 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TMEM179B	Q7Z7N9	219 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	PATL1	Q86TB9	770 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	HS3ST5	Q8IZT8	346 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	RNF175	Q8N4F7	328 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	DHRSX	Q8N5I4	330 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	PNLDC1	Q8NA58	520 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	OR8B3	Q8NGG8	313 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	CYGB	Q8WWM9	190 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TMEM45B	Q96B21	275 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF75A	Q96N20	296 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TSPAN32	Q96QS1	320 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	OR8B2	Q96RD0	313 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SEPHS2	Q99611	448 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	C9orf16	Q9BUW7	83 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TBL1XR1	Q9BZK7	514 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	PITHD1	Q9GZP4	211 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	NAA50	Q9GZZ1	169 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	IPPK	Q9H8X2	491 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SMURF2	Q9HAU4	748 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	VCX3A	Q9NNX9	186 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	DDX18	Q9NVP1	670 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	ASIC5	Q9NY37	505 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	FZR1	Q9UM11	496 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	SLC9A8	Q9Y2E8	581 aa		3.86	□□□□□ -1.79
MSI2-216	ENST00000582772	TNPO3	Q9Y5L0	923 aa	Known RBP	3.86	□□□□□ -1.79
MSI2-216	ENST00000582772		A0A087WXM4	84 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	TRBV23-1	A0A0A0MS06	115 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	RNF103-CHMP3	A0A140T963	221 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772		A0A1W2PR48	441 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF503-AS2	A6NEH8	195 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772	CCDC160	A6NGH7	325 aa		3.85	□□□□□ -1.79
MSI2-216	ENST00000582772		K7EPI3	171 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms