RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 SLC35F1Q5T1Q4 408 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 C1orf146Q5VVC0 180 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
SNORD55-201ENST00000581525 HS3ST5Q8IZT8 346 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 SLC37A3Q8NCC5 494 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 SDR9C7Q8NEX9 313 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 GJC3Q8NFK1 279 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 OR5K1Q8NHB7 308 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 CDH20Q9HBT6 801 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 RPRD1BQ9NQG5 326 aaKnown RBP10.85□□□□□ -0.67
SNORD55-201ENST00000581525 TBCCD1Q9NVR7 557 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 CYB5R1Q9UHQ9 305 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 KCNG2Q9UJ96 466 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 NDRG4Q9ULP0 352 aaKnown RBP10.85□□□□□ -0.67
SNORD55-201ENST00000581525 LHFPL6Q9Y693 200 aa10.85□□□□□ -0.67
SNORD55-201ENST00000581525 MTORP42345 2549 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 A0A096LNT2 108 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 J3QW42 95 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 EBAG9O00559 213 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 SGCEO43556 437 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 TIPRLO75663 272 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 GGT2P36268 569 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 CENPAP49450 140 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 GDI2P50395 445 aaKnown RBP10.84□□□□□ -0.67
SNORD55-201ENST00000581525 DAPP51397 102 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 ARHGDIAP52565 204 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 ACTR3P61158 418 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 TEKQ02763 1124 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 TNK1Q13470 666 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 SLC36A3Q495N2 470 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
SNORD55-201ENST00000581525 ACSM5Q6NUN0 579 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 ZNF774Q6NX45 483 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 VHLLQ6RSH7 139 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 LRP11Q86VZ4 500 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 CIARTQ8N365 385 aaPredicted RBP10.84□□□□□ -0.67
SNORD55-201ENST00000581525 PARP8Q8N3A8 854 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 OR2T4Q8NH00 348 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 ZNRF4Q8WWF5 429 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 IPCEF1Q8WWN9 437 aaPredicted RBP10.84□□□□□ -0.67
SNORD55-201ENST00000581525 PTP4A1Q93096 173 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 MARS2Q96GW9 593 aaKnown RBP10.84□□□□□ -0.67
SNORD55-201ENST00000581525 SORCS2Q96PQ0 1159 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 DCLRE1CQ96SD1 692 aaKnown RBP10.84□□□□□ -0.67
SNORD55-201ENST00000581525 MS4A5Q9H3V2 200 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 MARCH7Q9H992 704 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 TBC1D23Q9NUY8 699 aa10.84□□□□□ -0.67
SNORD55-201ENST00000581525 MRPL22Q9NWU5 206 aaKnown RBP10.84□□□□□ -0.67
SNORD55-201ENST00000581525 C5orf49A4QMS7 147 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 E2F6O75461 281 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 SOX14O95416 240 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 GPANK1O95872 356 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 FCGR1AP12314 374 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 FASP25445 335 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 EFNB1P98172 346 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 LINC01590Q5TEZ4 76 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 RGS7BPQ6MZT1 257 aaPredicted RBP10.83□□□□□ -0.68
SNORD55-201ENST00000581525 SLC18B1Q6NT16 456 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 SLC27A4Q6P1M0 643 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 UNQ6126/PRO20091Q6UXV3 157 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 COLCA1Q6ZS62 124 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 BIVMQ86UB2 503 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 HIPK1Q86Z02 1210 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF101Q8IZC7 436 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 SVOPLQ8N434 492 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 NEU4Q8WWR8 484 aaPredicted RBP10.83□□□□□ -0.68
SNORD55-201ENST00000581525 C4orf45Q96LM5 186 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 FOXN4Q96NZ1 517 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 COQ7Q99807 217 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 GABARAPL1Q9H0R8 117 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF556Q9HAH1 456 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 ELOVL3Q9HB03 270 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 SLC25A19Q9HC21 320 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 MYOZ1Q9NP98 299 aaPredicted RBP10.83□□□□□ -0.68
SNORD55-201ENST00000581525 NKIRAS2Q9NYR9 191 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.83□□□□□ -0.68
SNORD55-201ENST00000581525 ASH2LQ9UBL3 628 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 EIF3KQ9UBQ5 218 aaKnown RBP10.83□□□□□ -0.68
SNORD55-201ENST00000581525 ZFHX3Q15911 3703 aa10.83□□□□□ -0.68
SNORD55-201ENST00000581525 NIPBLQ6KC79 2804 aaeCLIP10.82□□□□□ -0.68
SNORD55-201ENST00000581525 TRIM64A6NGJ6 449 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 TRIM64BA6NI03 449 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 VWC2LB2RUY7 222 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 NDUFS8O00217 210 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 RER1O15258 196 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 NGFP01138 241 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 IFNGP01579 166 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 HMGN1P05114 100 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 ADH4P08319 380 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 INHBBP09529 407 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 CSF3P09919 207 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 FAM157BP0CG42 384 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 ERFP50548 548 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 BLVRAP53004 296 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 ESRRGP62508 458 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 CRMP1Q14194 572 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 GINS1Q14691 196 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 MOGQ16653 247 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 MEP1BQ16820 701 aa10.82□□□□□ -0.68
SNORD55-201ENST00000581525 ELFN2Q5R3F8 820 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms