RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 JAM3Q9BX67 310 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 HDHD2Q9H0R4 259 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 RERGLQ9H628 205 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 WDR76Q9H967 626 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 ADGRL4Q9HBW9 690 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 CCNB1IP1Q9NPC3 277 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 DDX28Q9NUL7 540 aaKnown RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 CNOT2Q9NZN8 540 aaKnown RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 EXOGQ9Y2C4 368 aaKnown RBP9.07□□□□□ -0.96
CCDC47-203ENST00000580986 LRRC42Q9Y546 428 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 LHFPL6Q9Y693 200 aa9.07□□□□□ -0.96
CCDC47-203ENST00000580986 J3QRE1 110 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF593O00488 134 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ICMTO60725 284 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 SEC14L2O76054 403 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 MPZL1O95297 269 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 SERPINA5P05154 406 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 THBDP07204 575 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 OR2T7P0C7T2 308 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF14P17017 642 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF32P17041 273 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 CRYGSP22914 178 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 GRNP28799 593 aaKnown RBP9.06□□□□□ -0.96
CCDC47-203ENST00000580986 NUDT6P53370 316 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 RAB1AP62820 205 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ACTC1P68032 377 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ACTA1P68133 377 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ECH1Q13011 328 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 TSC22D1Q15714 1073 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 KLHL22Q53GT1 634 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 KRT80Q6KB66 452 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 DEGS2Q6QHC5 323 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 BCDIN3DQ7Z5W3 292 aaKnown RBP9.06□□□□□ -0.96
CCDC47-203ENST00000580986 CDC20BQ86Y33 519 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ERI1Q8IV48 349 aaKnown RBP9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ALDH16A1Q8IZ83 802 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 LRRC18Q8N456 261 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 OR2AJ1Q8NGZ0 328 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 OR2T27Q8NH04 317 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 CNIH3Q8TBE1 160 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ST7LQ8TDW4 575 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ASB17Q8WXJ9 295 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ZMYND19Q96E35 227 aaPredicted RBP9.06□□□□□ -0.96
CCDC47-203ENST00000580986 WFIKKN1Q96NZ8 548 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 SH3GL3Q99963 347 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 CDADC1Q9BWV3 514 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 OR2H1Q9GZK4 316 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 EMC7Q9NPA0 242 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 INPP5EQ9NRR6 644 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 ASH2LQ9UBL3 628 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 KCNN3Q9UGI6 736 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 POLR1DQ9Y2S0 133 aa9.06□□□□□ -0.96
CCDC47-203ENST00000580986 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 ZNF503-AS2A6NEH8 195 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 OR6C6A6NF89 314 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 FAM171A2A8MVW0 826 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 J3QW42 95 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 SGCEO43556 437 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 RAB36O95755 333 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 CLDN1O95832 211 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 FADS2O95864 444 aaKnown RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 GPANK1O95872 356 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 IGHA1P01876 353 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 HLA-HP01893 362 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 CD79AP11912 226 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 ALOX5APP20292 161 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 PTAFRP25105 342 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 DCKP27707 260 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 OTX1P32242 354 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 DCTDP32321 178 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 KIR2DL3P43628 341 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 NR1H2P55055 460 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 PSG4Q00888 419 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 ROM1Q03395 351 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 PLP2Q04941 152 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 MED21Q13503 144 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 DAZAP2Q15038 168 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 RAB35Q15286 201 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 MEP1BQ16820 701 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 BEX5Q5H9J7 111 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 ELFN2Q5R3F8 820 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 RBM48Q5RL73 367 aaKnown RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 C6orf141Q5SZD1 244 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 LAIR2Q6ISS4 152 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 UGT2A3Q6UWM9 527 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 LYPD4Q6UWN0 246 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 TMEM108Q6UXF1 575 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 DPY19L4Q7Z388 723 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 MDP1Q86V88 176 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 C1orf174Q8IYL3 243 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 OR6N2Q8NGY6 317 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 OR52N5Q8NH56 324 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 RNF133Q8WVZ7 376 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 RNFT2Q96EX2 444 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 COQ7Q99807 217 aa9.05□□□□□ -0.96
CCDC47-203ENST00000580986 YTHDF1Q9BYJ9 559 aaKnown RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 FGF20Q9NP95 211 aaPredicted RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 PNRC2Q9NPJ4 139 aaKnown RBP9.05□□□□□ -0.96
CCDC47-203ENST00000580986 FKBP14Q9NWM8 211 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms