RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 RIMS3Q9UJD0 308 aa6.06□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SLC7A7Q9UM01 511 aa6.06□□□□□ -1.44
CDK5RAP3-209ENST00000578663 AURKCQ9UQB9 309 aa6.06□□□□□ -1.44
CDK5RAP3-209ENST00000578663 INSIG2Q9Y5U4 225 aa6.06□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TANC2Q9HCD6 1990 aa6.06□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A0A087WUJ7 227 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CHP2O43745 196 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RRP9O43818 475 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 AKAP8O43823 692 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PIP5K1CO60331 668 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FKBP6O75344 327 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PPP1R3DO95685 299 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 HLA-HP01893 362 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RAP2AP10114 183 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 UMPSP11172 480 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RHCEP18577 417 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CXCR1P25024 350 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RRM2P31350 389 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CAPZA2P47755 286 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 UGT2B15P54855 530 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PROK1P58294 105 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SPIBQ01892 262 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 EGR4Q05215 589 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PPP1R8Q12972 351 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FAM189A2Q15884 450 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 MOGQ16653 247 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RGS7BPQ6MZT1 257 aaPredicted RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF771Q7L3S4 317 aaPredicted RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PIWIL3Q7Z3Z3 882 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CYP4Z1Q86W10 505 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SPICQ8N5J4 248 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PAPD5Q8NDF8 572 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CPEB3Q8NE35 698 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PFN4Q8NHR9 129 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TMEM255BQ8WV15 326 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 DNAJA4Q8WW22 397 aaPredicted RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 GTF3AQ92664 365 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SLC38A4Q969I6 547 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 UPRTQ96BW1 309 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 DHRS1Q96LJ7 313 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PTDSS2Q9BVG9 487 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FNDC11Q9BVV2 318 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CHID1Q9BWS9 393 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 POLR2J2Q9GZM3 115 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 POLR2J3Q9H1A7 115 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 C12orf10Q9HB07 376 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 NOX4Q9NPH5 578 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 MMP26Q9NRE1 261 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SELENONQ9NZV5 590 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TAAR3PQ9P1P4 343 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 NKX1-2Q9UD57 310 aaPredicted RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SEC14L4Q9UDX3 406 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 IL20RAQ9UHF4 553 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FAM32AQ9Y421 112 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RNF114Q9Y508 228 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 POMT1Q9Y6A1 747 aa6.05□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A0A087WUU8 490 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TRBV4-1A0A0J9YWV2 114 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A8MVM7 634 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 LRRN3E7EW58 273 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 H3BNX3 289 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TRAPPC2LH3BP13 241 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 KPNA4O00629 521 aaPredicted RBP6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 HOXA3O43365 443 aaPredicted RBP6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 NPIPB7O75200 414 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ENTPD5O75356 428 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TIPRLO75663 272 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 UBL3O95164 117 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RAB36O95755 333 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OPN1MWP04001 364 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 H1F0P07305 194 aaKnown RBP6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ADH4P08319 380 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OPN1MW2P0DN77 364 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OPN1MW3P0DN78 364 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 IGHV4-38-2P0DP08 117 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 THRBP10828 461 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PNMTP11086 282 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CD79AP11912 226 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF43P17038 809 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CPT2P23786 658 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CLDN17P56750 224 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 BPIFB3P59826 476 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 KRTAP10-3P60369 221 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PAX8Q06710 450 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ST3GAL3Q11203 375 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TRAM2Q15035 370 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SEC23BQ15437 767 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TMEM155Q4W5P6 130 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FGD3Q5JSP0 725 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SWT1Q5T5J6 900 aaKnown RBP6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 C1orf140Q5VVS0 124 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OR2T5Q6IEZ7 315 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TBPL2Q6SJ96 375 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 LINC00114Q6XXX2 140 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TMEM123Q8N131 208 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OR52E2Q8NGJ4 325 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OR2T29Q8NH02 315 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OR52J3Q8NH60 311 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF519Q8TB69 540 aa6.04□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SYNPRQ8TBG9 265 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms