RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 SLC16A9Q7RTY1 509 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 MYPOPQ86VE0 399 aaPredicted RBP11.04□□□□□ -0.64
MKS1-206ENST00000577824 CDC20BQ86Y33 519 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 WFDC8Q8IUA0 241 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 GJC3Q8NFK1 279 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 OTOSQ8NHW6 89 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 ST7LQ8TDW4 575 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 Q96MT0 163 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 MNTQ99583 582 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 TMEM204Q9BSN7 226 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 HDHD2Q9H0R4 259 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 ADGRL4Q9HBW9 690 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 CCNB1IP1Q9NPC3 277 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 PNRC2Q9NPJ4 139 aaKnown RBP11.04□□□□□ -0.64
MKS1-206ENST00000577824 RASSF1Q9NS23 344 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 DDX28Q9NUL7 540 aaKnown RBP11.04□□□□□ -0.64
MKS1-206ENST00000577824 MRPS18AQ9NVS2 196 aaKnown RBP11.04□□□□□ -0.64
MKS1-206ENST00000577824 H2AFY2Q9P0M6 372 aaPredicted RBP11.04□□□□□ -0.64
MKS1-206ENST00000577824 ICE1Q9Y2F5 2266 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 DOPEY2Q9Y3R5 2298 aa11.04□□□□□ -0.64
MKS1-206ENST00000577824 CENPEQ02224 2701 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 SNTNA6NMZ2 147 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 A6NNC1 897 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 J3QRE1 110 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 SGCEO43556 437 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 SYNGR3O43761 229 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 SELENOFO60613 162 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 SBK2P0C263 348 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 PATE4P0C8F1 98 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 COX6B1P14854 86 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 ZNF823P16415 610 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 PTAFRP25105 342 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 MTNR1AP48039 350 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 RPS7P62081 194 aaKnown RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 ZNF91Q05481 1191 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 RAB35Q15286 201 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 KRTAP27-1Q3LI81 207 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 CCDC92Q53HC0 331 aaPredicted RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 PABPC1L2AQ5JQF8 200 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 SP5Q6BEB4 398 aaPredicted RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 LAIR2Q6ISS4 152 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 CFAP77Q6ZQR2 320 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 VASH1Q7L8A9 365 aaPredicted RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 SHFQ7M4L6 423 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 ERI1Q8IV48 349 aaKnown RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 OR10S1Q8NGN2 331 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 OR6N2Q8NGY6 317 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 C14orf79Q96F83 325 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 ZC3HAV1LQ96H79 300 aaKnown RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 MAP6Q96JE9 813 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 CNN2Q99439 309 aaKnown RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 YIPF3Q9GZM5 350 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 ESRP2Q9H6T0 727 aaKnown RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 GDF2Q9UK05 429 aaPredicted RBP11.03□□□□□ -0.64
MKS1-206ENST00000577824 POLR1DQ9Y2S0 133 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 CSMD2Q7Z408 3487 aa11.03□□□□□ -0.64
MKS1-206ENST00000577824 UNC79Q9P2D8 2635 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 DPRXA6NFQ7 191 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 ZNF593O00488 134 aaPredicted RBP11.02□□□□□ -0.65
MKS1-206ENST00000577824 RER1O15258 196 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 DOK2O60496 412 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 TMCC2O75069 709 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 PTHP01270 115 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 CELA3BP08861 270 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 DBTP11182 482 aaKnown RBP11.02□□□□□ -0.65
MKS1-206ENST00000577824 ZNF35P13682 527 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 CD40P25942 277 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 OTX1P32242 354 aaPredicted RBP11.02□□□□□ -0.65
MKS1-206ENST00000577824 SLC15A1P46059 708 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 ZNF83P51522 516 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 IDH3GP51553 393 aaPredicted RBP11.02□□□□□ -0.65
MKS1-206ENST00000577824 NAAAQ02083 359 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 PIGFQ07326 219 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 BSPH1Q075Z2 132 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 OTPQ5XKR4 325 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 B3GLCTQ6Y288 498 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 DPY19L4Q7Z388 723 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 THAP5Q7Z6K1 395 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 LINC00346Q8IVM7 164 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 ALDH16A1Q8IZ83 802 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 CPEB3Q8NE35 698 aaKnown RBP11.02□□□□□ -0.65
MKS1-206ENST00000577824 IL17RDQ8NFM7 739 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 CNIH3Q8TBE1 160 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 RNF133Q8WVZ7 376 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 POM121L2Q96KW2 1035 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 COQ7Q99807 217 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 JAM3Q9BX67 310 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 RNF121Q9H920 327 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 EXOGQ9Y2C4 368 aaKnown RBP11.02□□□□□ -0.65
MKS1-206ENST00000577824 TMEM14AQ9Y6G1 99 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 TACC2O95359 2948 aa11.02□□□□□ -0.65
MKS1-206ENST00000577824 IGHV2OR16-5A0A0B4J2B6 119 aa11.01□□□□□ -0.65
MKS1-206ENST00000577824 IQCMA0A1B0GVH7 501 aa11.01□□□□□ -0.65
MKS1-206ENST00000577824 ZNF878C9JN71 531 aa11.01□□□□□ -0.65
MKS1-206ENST00000577824 M0R1B8 84 aa11.01□□□□□ -0.65
MKS1-206ENST00000577824 CASKO14936 926 aa11.01□□□□□ -0.65
MKS1-206ENST00000577824 SPARCP09486 303 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms