RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 OSMP13725 252 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 CCNOP22674 350 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 FASP25445 335 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 WNT5AP41221 380 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 CENPAP49450 140 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 EFNA4P52798 201 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 TEKQ02763 1124 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 CRMP1Q14194 572 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 MEP1BQ16820 701 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 VASH1Q7L8A9 365 aaPredicted RBP16.61■□□□□ 0.25
SS18-208ENST00000577751 ZNF101Q8IZC7 436 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 OR2T4Q8NH00 348 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 OR5K1Q8NHB7 308 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 TEX47Q8TBZ9 253 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 ZNRF4Q8WWF5 429 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 NMNAT2Q9BZQ4 307 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 CMC2Q9NRP2 79 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 NDRG4Q9ULP0 352 aaKnown RBP16.61■□□□□ 0.25
SS18-208ENST00000577751 LHFPL6Q9Y693 200 aa16.61■□□□□ 0.25
SS18-208ENST00000577751 FLNAP21333 2647 aaKnown RBP16.6■□□□□ 0.25
SS18-208ENST00000577751 TRIM64A6NGJ6 449 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 TRIM64BA6NI03 449 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 FAM171A2A8MVW0 826 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 SYNGR3O43761 229 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 SSX4O60224 188 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 DOK2O60496 412 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 F12P00748 615 aaPredicted RBP16.6■□□□□ 0.25
SS18-208ENST00000577751 ZNF250P15622 560 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 GRK5P34947 590 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 CCDC92Q53HC0 331 aaPredicted RBP16.6■□□□□ 0.25
SS18-208ENST00000577751 RGS7BPQ6MZT1 257 aaPredicted RBP16.6■□□□□ 0.25
SS18-208ENST00000577751 ACSM5Q6NUN0 579 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 FAHD1Q6P587 224 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 LRP11Q86VZ4 500 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 CIARTQ8N365 385 aaPredicted RBP16.6■□□□□ 0.25
SS18-208ENST00000577751 ATG16L2Q8NAA4 619 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 DNAJC9Q8WXX5 260 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 C18orf12Q96KH6 178 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 SORCS2Q96PQ0 1159 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 OR51B6Q9H340 312 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 PLEK2Q9NYT0 353 aa16.6■□□□□ 0.25
SS18-208ENST00000577751 ACANP16112 2415 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 CHD3Q12873 2000 aaKnown RBP16.59■□□□□ 0.25
SS18-208ENST00000577751 IGLV3-9A0A075B6K5 115 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 OR6C6A6NF89 314 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 RER1O15258 196 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 FCGR1AP12314 374 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 GGT2P36268 569 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 SLC25A1P53007 311 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 NUDT6P53370 316 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 ACTR3P61158 418 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 ERVS71-1P61550 626 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 CDK5Q00535 292 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 TNK1Q13470 666 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 SLC27A4Q6P1M0 643 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 C1orf174Q8IYL3 243 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 IQCF1Q8N6M8 205 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 GJC3Q8NFK1 279 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 OR1J1Q8NGS3 322 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 COX4I2Q96KJ9 171 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 C4orf45Q96LM5 186 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 SYT3Q9BQG1 590 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 MRPL22Q9NWU5 206 aaKnown RBP16.59■□□□□ 0.25
SS18-208ENST00000577751 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.59■□□□□ 0.25
SS18-208ENST00000577751 MYEF2Q9P2K5 600 aaKnown RBP16.59■□□□□ 0.25
SS18-208ENST00000577751 EIF3KQ9UBQ5 218 aaKnown RBP16.59■□□□□ 0.25
SS18-208ENST00000577751 ATPIF1Q9UII2 106 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 FZR1Q9UM11 496 aa16.59■□□□□ 0.25
SS18-208ENST00000577751 H7C1Q1 480 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 IFNGP01579 166 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 LCKP06239 509 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 PYCR1P32322 319 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 HTR5AP47898 357 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 DAPP51397 102 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 GINS1Q14691 196 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 SLC18B1Q6NT16 456 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 UNQ6126/PRO20091Q6UXV3 157 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 HIPK1Q86Z02 1210 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 PARP8Q8N3A8 854 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 OR10H5Q8NGA6 315 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 OR1F12Q8NHA8 337 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 SYNPRQ8TBG9 265 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 LRTOMTQ8WZ04 291 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 VRK1Q99986 396 aaPredicted RBP16.58■□□□□ 0.24
SS18-208ENST00000577751 RAB1BQ9H0U4 201 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 CYB5R1Q9UHQ9 305 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 DUSP13Q9UII6 198 aa16.58■□□□□ 0.24
SS18-208ENST00000577751 TEP1Q99973 2627 aaKnown RBP16.58■□□□□ 0.24
SS18-208ENST00000577751 RIIAD1A6NNX1 92 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 G3V2T6 193 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 M0R233 179 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 LY6HO94772 140 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 NGFP01138 241 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 HLA-DQA2P01906 255 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 INHBBP09529 407 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 ZNF3P17036 446 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 SPI1P17947 270 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 POU1F1P28069 291 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 DSCR9P59020 149 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 CORO6Q6QEF8 472 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms