RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 NUAK2Q9H093 628 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 OR51E2Q9H255 320 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 KCNN2Q9H2S1 579 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 ZNF703Q9H7S9 590 aaPredicted RBP8.99□□□□□ -0.97
SS18-207ENST00000577636 WDR76Q9H967 626 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 SIAEQ9HAT2 523 aa8.99□□□□□ -0.97
SS18-207ENST00000577636 LRRC3CA6NJW4 275 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 EIF1AYO14602 144 aaKnown RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 SELENOFO60613 162 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 SMPD2O60906 423 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 FZD7O75084 574 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 KHDRBS3O75525 346 aaKnown RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 CLPXO76031 633 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 HRGP04196 525 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 GALP22466 123 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 CTSSP25774 331 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 GUCA1AP43080 201 aaPredicted RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 BIDP55957 195 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 CARD18P57730 90 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 AQP6Q13520 282 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 SSX1Q16384 188 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 ZNF239Q16600 458 aaKnown RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 FBXL19-AS1Q494R0 122 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 CCDC58Q4VC31 144 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 THEM4Q5T1C6 240 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 HBMQ6B0K9 141 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 LINC00299Q6ZSB3 139 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 ESPNLQ6ZVH7 1005 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 VASH1Q7L8A9 365 aaPredicted RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 ZBTB46Q86UZ6 589 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 LSRQ86X29 649 aaPredicted RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 OR6V1Q8N148 313 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 KDM8Q8N371 416 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 ZNF454Q8N9F8 522 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 FAM83FQ8NEG4 500 aaPredicted RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 OR10H5Q8NGA6 315 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 OR6N2Q8NGY6 317 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 ZFAND2BQ8WV99 257 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 SLC25A44Q96H78 314 aaPredicted RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 TSSK2Q96PF2 358 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 RBM24Q9BX46 236 aaKnown RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 ISG20L2Q9H9L3 353 aaKnown RBP8.98□□□□□ -0.97
SS18-207ENST00000577636 ACKR4Q9NPB9 350 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 QPCTLQ9NXS2 382 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 GNG8Q9UK08 70 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 B9D1Q9UPM9 204 aa8.98□□□□□ -0.97
SS18-207ENST00000577636 PNMA8CA0A1B0GUJ8 204 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 TRDV1A0A1B0GX56 115 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 A0A1W2PPR1 153 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 TVP23AA6NH52 213 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 METTL15A6NJ78 407 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 RGS9O75916 674 aaPredicted RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 TFP02787 698 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 HPNP05981 417 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 HLA-DOBP13765 273 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 ENPP1P22413 925 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 S100A5P33763 92 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 RAC3P60763 192 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 ZNF85Q03923 595 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 MOGQ16653 247 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 CDONQ4KMG0 1287 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 TP53I3Q53FA7 332 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 WIPI1Q5MNZ9 446 aaPredicted RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 LINC01590Q5TEZ4 76 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 VASNQ6EMK4 673 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 SLC18B1Q6NT16 456 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 RPL22L1Q6P5R6 122 aaKnown RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 KCTD18Q6PI47 426 aaPredicted RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 CXorf67Q86X51 503 aaPredicted RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 MS4A15Q8N5U1 240 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 MEIOBQ8N635 442 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 ZNF511Q8NB15 262 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 SYT14Q8NB59 555 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 ZNF485Q8NCK3 441 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 OR6X1Q8NH79 312 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 OR2V1Q8NHB1 315 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 MCFD2Q8NI22 146 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 DYNC2LI1Q8TCX1 351 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 THEM6Q8WUY1 208 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 TMEM203Q969S6 136 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 PERPQ96FX8 193 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 CENPOQ9BU64 300 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 TMED9Q9BVK6 235 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 SF3B5Q9BWJ5 86 aaKnown RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 CDADC1Q9BWV3 514 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 MED29Q9NX70 200 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 PAQR5Q9NXK6 330 aaPredicted RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 GALNT8Q9NY28 637 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 CCDC59Q9P031 241 aaKnown RBP8.97□□□□□ -0.97
SS18-207ENST00000577636 IKZF2Q9UKS7 526 aa8.97□□□□□ -0.97
SS18-207ENST00000577636 IGLV1-36A0A0B4J1U3 117 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 VGLL3A8MV65 326 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 TNFSF11O14788 317 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 GPRIN2O60269 458 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 GPX5O75715 221 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 SULT1C4O75897 302 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 SYNGR4O95473 234 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 SPARCP09486 303 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms