RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SCCPDHQ8NBX0 429 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 VANGL1Q8TAA9 524 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 LHX4Q969G2 390 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 TBX15Q96SF7 602 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 MCHR1Q99705 422 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 DPAGT1Q9H3H5 408 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 WDR55Q9H6Y2 383 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 NECAP2Q9NVZ3 263 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 AURKAIP1Q9NWT8 199 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 ZNF229Q9UJW7 825 aa13.5□□□□□ -0.25
CTDNEP1-211ENST00000575783 DNAH3Q8TD57 4116 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 IGKV1D-43A0A0B4J1Z2 117 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 IGHV1-69DA0A0B4J2H0 117 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 ZNF879B4DU55 563 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 SDHDO14521 159 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 IGHV1-69P01742 117 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 KITLGP21583 273 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 FUT4P22083 530 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 EPHA3P29320 983 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 ERFP50548 548 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 FMODQ06828 376 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 FAM27BQ5VT28 67 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 C11orf87Q6NUJ2 197 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 REEP3Q6NUK4 255 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 MOGAT3Q86VF5 341 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 OR10AD1Q8NGE0 317 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 ASB10Q8WXI3 467 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 SEPHS2Q99611 448 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 RAD21L1Q9H4I0 556 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 SLCO1B3Q9NPD5 702 aa13.49□□□□□ -0.25
CTDNEP1-211ENST00000575783 PRORSD1PA6NEY8 169 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 LRRC30A6NM36 301 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 CPSF4LA6NMK7 179 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 PHYHO14832 338 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 GPR37O15354 613 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 CHP2O43745 196 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 ASAH2BP0C7U1 165 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 BMP2P12643 396 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 AQP1P29972 269 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 ZNF133P52736 654 aaPredicted RBP13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 UGT2B15P54855 530 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 CDK6Q00534 326 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 CD47Q08722 323 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 DBPQ10586 325 aaPredicted RBP13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 FADDQ13158 208 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 HERPUD1Q15011 391 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 GCNT6Q5T4J0 391 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 ZNF613Q6PF04 617 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 ZNF841Q6ZN19 808 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 LDLRAD3Q86YD5 345 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 NPEPL1Q8NDH3 523 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 C10orf82Q8WW14 230 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 LRTOMTQ8WZ04 291 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 HAVCR1Q96D42 359 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 MEGF10Q96KG7 1140 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 WDFY2Q96P53 400 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 TECTBQ96PL2 329 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 ANGPT4Q9Y264 503 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 STARD10Q9Y365 291 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 FAM96BQ9Y3D0 163 aa13.48□□□□□ -0.25
CTDNEP1-211ENST00000575783 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 M0R3H8 397 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 TYROBPO43914 113 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 TSPAN9O75954 239 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 MMP9P14780 707 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 DAP3P51398 398 aaKnown RBP13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 PCBD1P61457 104 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 RPL18Q07020 188 aaKnown RBP13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 METTL11BQ5VVY1 283 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 NXNQ6DKJ4 435 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 C1orf94Q6P1W5 598 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 HDDC2Q7Z4H3 204 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 ARMC8Q8IUR7 673 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 SMYD1Q8NB12 490 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 C19orf18Q8NEA5 215 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 ITPKCQ96DU7 683 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 PAIP1Q9H074 479 aaKnown RBP13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 TBCCD1Q9NVR7 557 aa13.47□□□□□ -0.25
CTDNEP1-211ENST00000575783 SERPINB7O75635 380 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 THY1P04216 161 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 LIPFP07098 398 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 CST2P09228 141 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 IDO1P14902 403 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 TUBG1P23258 451 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 AQP2P41181 271 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 GUCA1AP43080 201 aaPredicted RBP13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 SRP9P49458 86 aaKnown RBP13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 GUCY1A3Q02108 690 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 ENTPD8Q5MY95 495 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 CD276Q5ZPR3 534 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 SLC35E4Q6ICL7 350 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 SLC2A7Q6PXP3 512 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 DCDC5Q6ZRR9 648 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 C1orf87Q8N0U7 546 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 C10orf111Q8N326 155 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 GTF2H4Q92759 462 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 HDAC2Q92769 488 aaKnown RBP13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 PTP4A1Q93096 173 aa13.46□□□□□ -0.25
CTDNEP1-211ENST00000575783 MMADHCQ9H3L0 296 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms