RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LOC100130705A0A1B0GUX0 176 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 VSTM5A8MXK1 200 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 H7C417 338 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 SMAD7O15105 426 aaKnown RBP11.44□□□□□ -0.58
RPAIN-216ENST00000575599 SSX4O60224 188 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 SLC16A7O60669 478 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 MMP7P09237 267 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-216ENST00000575599 MSR1P21757 451 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 NR4A1P22736 598 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
RPAIN-216ENST00000575599 NOS3P29474 1203 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 NUDT6P53370 316 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 RAB35Q15286 201 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 SWI5Q1ZZU3 235 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 TBC1D28Q2M2D7 210 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 MST1LQ2TV78 715 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 PABPC1L2AQ5JQF8 200 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 CLEC12AQ5QGZ9 265 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 FAM27BQ5VT28 67 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 FOXL2NBQ6ZUU3 175 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 JAZF1Q86VZ6 243 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 CIARTQ8N365 385 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-216ENST00000575599 PAQR4Q8N4S7 273 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-216ENST00000575599 SETD9Q8NE22 299 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 AKR7LQ8NHP1 331 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 C18orf12Q96KH6 178 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 MBOAT4Q96T53 435 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 APOL4Q9BPW4 351 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 TSSK6Q9BXA6 273 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 C1orf198Q9H425 327 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 PLK3Q9H4B4 646 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 BARX1Q9HBU1 254 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-216ENST00000575599 EMC7Q9NPA0 242 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 POLE4Q9NR33 117 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 REV1Q9UBZ9 1251 aa11.44□□□□□ -0.58
RPAIN-216ENST00000575599 B9A039 149 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 AHCYL1O43865 530 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 KHDRBS3O75525 346 aaKnown RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 TXNDC12O95881 172 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 PTHP01270 115 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 SCG5P05408 212 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 CST2P09228 141 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 FAM157BP0CG42 384 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 APEHP13798 732 aaKnown RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 CCNOP22674 350 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 APLNRP35414 380 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 CDKN2AP42771 156 aaKnown RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 CENPAP49450 140 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 CDC42P60953 191 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 ENDOGQ14249 297 aaKnown RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 GINS1Q14691 196 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 PTGES3Q15185 160 aaKnown RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 EFNB3Q15768 340 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 OTPQ5XKR4 325 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 SLC27A4Q6P1M0 643 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 LEG1Q6P5S2 330 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 UGT2A3Q6UWM9 527 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 OR2T33Q8NG76 320 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 OR4K13Q8NH42 304 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 TFAP2CQ92754 450 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 PLEKHA8Q96JA3 519 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 NMNAT3Q96T66 252 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 VRK1Q99986 396 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 ZNF416Q9BWM5 594 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 NUAK2Q9H093 628 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 IMPAD1Q9NX62 359 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 IL20Q9NYY1 176 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 VSX1Q9NZR4 365 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 FZR1Q9UM11 496 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 CMAHPQ9Y471 501 aa11.43□□□□□ -0.58
RPAIN-216ENST00000575599 TEP1Q99973 2627 aaKnown RBP11.43□□□□□ -0.58
RPAIN-216ENST00000575599 C12orf71A8MTZ7 269 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 DLGAP1O14490 977 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 SLC16A6O15403 523 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 LY6HO94772 140 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 RENP00797 406 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 HMGN1P05114 100 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 IGFBP1P08833 259 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-216ENST00000575599 INHBBP09529 407 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 HIST1H1CP16403 213 aaKnown RBP11.42□□□□□ -0.58
RPAIN-216ENST00000575599 STOMP27105 288 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 GLRXP35754 106 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 POLR2IP36954 125 aaKnown RBP11.42□□□□□ -0.58
RPAIN-216ENST00000575599 PCBD1P61457 104 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 RPS23P62266 143 aaKnown RBP11.42□□□□□ -0.58
RPAIN-216ENST00000575599 PSG4Q00888 419 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 TNK1Q13470 666 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 IL18R1Q13478 541 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 MED21Q13503 144 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 SLC35F1Q5T1Q4 408 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-216ENST00000575599 C8orf59Q8N0T1 100 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-216ENST00000575599 CPEB3Q8NE35 698 aaKnown RBP11.42□□□□□ -0.58
RPAIN-216ENST00000575599 SDR9C7Q8NEX9 313 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 OR1J2Q8NGS2 313 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 CNBD2Q96M20 576 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 TSSK2Q96PF2 358 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 SMR3AQ99954 134 aa11.42□□□□□ -0.58
RPAIN-216ENST00000575599 SYT3Q9BQG1 590 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms