RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 EFNB3Q15768 340 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 MST1LQ2TV78 715 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 GPR107Q5VW38 600 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF730Q6ZMV8 503 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 PTCHD4Q6ZW05 846 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 TSEN54Q7Z6J9 526 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 WDFY1Q8IWB7 410 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 GNPDA2Q8TDQ7 276 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 MS4A3Q96HJ5 214 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 KCNK17Q96T54 332 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 COPS4Q9BT78 406 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 SLC19A3Q9BZV2 496 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF442Q9H7R0 627 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 MYOZ1Q9NP98 299 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 PLCXD1Q9NUJ7 323 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 GLTPQ9NZD2 209 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF229Q9UJW7 825 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 A4GNTQ9UNA3 340 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 CMAHPQ9Y471 501 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 SPEF1Q9Y4P9 236 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 PCDHGB1Q9Y5G3 927 aa8.36□□□□□ -1.07
NPLOC4-216ENST00000574344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.35□□□□□ -1.073e-11■■■□□ 17.3
NPLOC4-216ENST00000574344 LOC390937A0A1W2PQ73 354 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 A0A1W2PRG6 482 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 H3BMQ9 156 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 XPNPEP2O43895 674 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 FARS2O95363 451 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 BCL10O95999 233 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 IGHG1P01857 330 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 APEHP13798 732 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 CALRP27797 417 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 GIPRP48546 466 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 GZMKP49863 264 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 RAB1AP62820 205 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 PTGES3Q15185 160 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 TBCEQ15813 527 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 CYB5R2Q6BCY4 276 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 PGBD2Q6P3X8 592 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 CDK20Q8IZL9 346 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 LRRC17Q8N6Y2 441 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 OR4K5Q8NGD3 323 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 OR6X1Q8NH79 312 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 PFN4Q8NHR9 129 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 TMEM255BQ8WV15 326 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 TRUB1Q8WWH5 349 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 TMIGD2Q96BF3 282 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 C12orf43Q96C57 262 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 SLC25A44Q96H78 314 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 PLEKHA8Q96JA3 519 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 COG8Q96MW5 612 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 RACGAP1Q9H0H5 632 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 TPK1Q9H3S4 243 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 DUSP21Q9H596 190 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 RNF121Q9H920 327 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 CHODLQ9H9P2 273 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 TAS2R5Q9NYW4 299 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 CNOT2Q9NZN8 540 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 FBXL3Q9UKT7 428 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 TMEM5Q9Y2B1 443 aa8.35□□□□□ -1.07
NPLOC4-216ENST00000574344 CUBNO60494 3623 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 MXRA5Q9NR99 2828 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 FFAR1O14842 300 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SLC22A1O15245 554 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 DHHO43323 396 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 LYPD3O95274 346 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 GASTP01350 101 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 MT-ND2P03891 347 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 F13BP05160 661 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ADRA2AP08913 450 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ASAH2BP0C7U1 165 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 PATE4P0C8F1 98 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 OR8G3PP0DMU2 310 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 IGHV4-31P0DP07 118 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 PIPP12273 146 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 DAOP14920 347 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF14P17017 642 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 NR4A1P22736 598 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 RBM34P42696 430 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 NR4A2P43354 598 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SERPINB10P48595 397 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF84P51523 738 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 RPS23P62266 143 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 RPL18Q07020 188 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ZP4Q12836 540 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 PIN1Q13526 163 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 MEDAGQ5VYS4 303 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 SLX4IPQ5VYV7 408 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 XAF1Q6GPH4 301 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF770Q6IQ21 691 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 FAM166AQ6J272 317 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 RPL13AP3Q6NVV1 102 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 TMEM53Q6P2H8 277 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 PODNL1Q6PEZ8 512 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 CD300LDQ6UXZ3 194 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF627Q7L945 461 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 ZNF367Q7RTV3 350 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 HDDC2Q7Z4H3 204 aa8.34□□□□□ -1.07
NPLOC4-216ENST00000574344 NKAIN4Q8IVV8 208 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms