RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 ZSCAN26Q16670 478 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TIMM50Q3ZCQ8 353 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PRR30Q53SZ7 412 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 FHL5Q5TD97 284 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZNF691Q5VV52 312 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 UBE2UQ5VVX9 321 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ANKRD22Q5VYY1 191 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ADAM5Q6NVV9 412 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZNF343Q6P1L6 599 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 FAHD1Q6P587 224 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 NPSR1Q6W5P4 371 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TMEM179Q6ZVK1 233 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 MBOAT2Q6ZWT7 520 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 MOB1BQ7L9L4 216 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 BHLHA15Q7RTS1 189 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 SSX6Q7RTT6 188 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ABHD12BQ7Z5M8 362 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 MRPL55Q7Z7F7 128 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 SETD3Q86TU7 594 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 HORMAD1Q86X24 394 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PLCZ1Q86YW0 608 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 NELFCDQ8IXH7 590 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 Q8N377 158 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 CDRT4Q8N9R6 151 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 NKAPP1Q8N9T2 125 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 OR1N2Q8NGR9 330 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 OR51A7Q8NH64 312 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 APH1BQ8WW43 257 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RASL10AQ92737 203 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TNFRSF14Q92956 283 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TMEM230Q96A57 120 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 VOPP1Q96AW1 172 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 LRRC45Q96CN5 670 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RCN3Q96D15 328 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 C8orf76Q96K31 380 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZNF514Q96K75 400 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZFP3Q96NJ6 502 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SERPINB11Q96P15 392 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 COL21A1Q96P44 957 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ARHGDIGQ99819 225 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 CIB1Q99828 191 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 CTRCQ99895 268 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 MICU1Q9BPX6 476 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 APOL2Q9BQE5 337 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 EBF4Q9BQW3 602 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 AGMATQ9BSE5 352 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 CNPY3Q9BT09 278 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 C19orf24Q9BVV8 132 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TRIM15Q9C019 465 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 CHRNA10Q9GZZ6 450 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 C1orf198Q9H425 327 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 RPF2Q9H7B2 306 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 PTGES2Q9H7Z7 377 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZDHHC11Q9H8X9 412 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 GNB4Q9HAV0 340 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PLGRKTQ9HBL7 147 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 NECAP2Q9NVZ3 263 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 CLEC5AQ9NY25 188 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SLC39A1Q9NY26 324 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 EURLQ9NYK6 297 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 WWOXQ9NZC7 414 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 VAPAQ9P0L0 249 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ZNF581Q9P0T4 197 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 Q9UF83 564 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 APOBEC3BQ9UH17 382 aaKnown RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 SHPKQ9UHJ6 478 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 PSMD13Q9UNM6 376 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 SLC22A14Q9Y267 594 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 ST3GAL6Q9Y274 331 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 TSSC4Q9Y5U2 329 aaPredicted RBP1.6□□□□□ -2.15
CHD3-217ENST00000574022 SLC25A15Q9Y619 301 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 URGCP-MRPS24S4R325 110 aa1.6□□□□□ -2.15
CHD3-217ENST00000574022 THSD7BQ9C0I4 1608 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 POGZQ7Z3K3 1410 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 A0A0A6YYD5 115 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 TRAV39A0A0B4J263 110 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 A6NDN8 102 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 HIDE1A8MVS5 230 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 RSPH10B2B2RC85 870 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 ANKRD63C9JTQ0 380 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 PRSS44E7EML9 344 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 H0YHG0 523 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 H3BNH8 94 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SMLR1H3BR10 107 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 K7EMT4 169 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 K7EN84 100 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 hCG_2039718K7EN88 272 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 PHF1O43189 567 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 B4GALT5O43286 388 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 GATCO43716 136 aaKnown RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 CRLF1O75462 422 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 CRTAPO75718 401 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 UTS2O95399 124 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 C6orf47O95873 294 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 IGHV3-13P01766 116 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 HOXC4P09017 264 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 OR8U9P0C7N5 309 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 RSPH10BP0C881 870 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 OCMP0CE72 109 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 USF1P22415 310 aaPredicted RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms