RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 TXNDC12O95881 172 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 IFNGP01579 166 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 CELA3BP08861 270 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 CRISP1P54107 249 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 RAD23AP54725 363 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 ESRRGP62508 458 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 HGFACQ04756 655 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 CR1LQ2VPA4 569 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 MESTQ5EB52 335 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 THEM4Q5T1C6 240 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 LEG1Q6P5S2 330 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 LNX2Q8N448 690 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 OR52E2Q8NGJ4 325 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 OR4Q3Q8NH05 313 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 NSMAFQ92636 917 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 MCHR2Q969V1 340 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 RIBC2Q9H4K1 309 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 RERGLQ9H628 205 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF442Q9H7R0 627 aa12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 FBXO9Q9UK97 447 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC22A23A1A5C7 686 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF99A8MXY4 864 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 BHLHE40O14503 412 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 HMGN1P05114 100 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 DAOP14920 347 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 CBR1P16152 277 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 HIST1H1CP16403 213 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 NPR2P20594 1047 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 GIFP27352 417 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 GRK5P34947 590 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 THBS4P35443 961 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 GIPRP48546 466 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 ALDH3A2P51648 485 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 FMODQ06828 376 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 LRRC36Q1X8D7 754 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 LRFN4Q6PJG9 635 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 DNM1P34Q6PK57 102 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 SDR9C7Q8NEX9 313 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 PLEKHA8Q96JA3 519 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 NMNAT3Q96T66 252 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 DOK1Q99704 481 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 USE1Q9NZ43 259 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 KLHL21Q9UJP4 597 aa12.76□□□□□ -0.37
NPLOC4-207ENST00000572346 IGHV2OR16-5A0A0B4J2B6 119 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 TMEM129A0AVI4 362 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF503-AS2A6NEH8 195 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 RIIAD1A6NNX1 92 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 HAX1O00165 279 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC16A7O60669 478 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 LILRA1O75019 489 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 SEC14L2O76054 403 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC2A10O95528 541 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 ALPLP05186 524 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 TACSTD2P09758 323 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 IL2RGP31785 369 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 CDKN2AP42771 156 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 CENPAP49450 140 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 PTGES3Q15185 160 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 HIST3H3Q16695 136 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 LIPNQ5VXI9 398 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 LPCAT4Q643R3 524 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF813Q6ZN06 617 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 PTCHD4Q6ZW05 846 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 NEU4Q8WWR8 484 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 OTULINQ96BN8 352 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF837Q96EG3 531 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 SNX18Q96RF0 628 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 FOXB1Q99853 325 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 PRRG3Q9BZD7 231 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-207ENST00000572346 A0A1W2PPL8 197 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 VSTM5A8MXK1 200 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 KHDRBS3O75525 346 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 FARS2O95363 451 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 ERCC1P07992 297 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 B4GALT1P15291 398 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF3P17036 446 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 CRABP1P29762 137 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 ARR3P36575 388 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 CAPZA2P47755 286 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 CHN2P52757 468 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 CDK5Q00535 292 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC34A1Q06495 639 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 NPRL3Q12980 569 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 ZIK1Q3SY52 487 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 C10orf128Q5T292 105 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 TMEM236Q5W0B7 351 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 ACSM5Q6NUN0 579 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC25A47Q6Q0C1 308 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF786Q8N393 782 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 GALNT4Q8N4A0 578 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC29A1Q99808 456 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms