RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 NPEPL1Q8NDH3 523 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 OR2Z1Q8NG97 314 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 FNDC8Q8TC99 324 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 HDAC2Q92769 488 aaKnown RBP15.97■□□□□ 0.15
SCARF1-204ENST00000570902 TMIGD2Q96BF3 282 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 SGTBQ96EQ0 304 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 ALG12Q9BV10 488 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 SAR1AQ9NR31 198 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 NDRG4Q9ULP0 352 aaKnown RBP15.97■□□□□ 0.15
SCARF1-204ENST00000570902 PPP1R3CQ9UQK1 317 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 LRCH1Q9Y2L9 728 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 MMP24Q9Y5R2 645 aa15.97■□□□□ 0.15
SCARF1-204ENST00000570902 IGKV1D-43A0A0B4J1Z2 117 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 A0A1B0GUS0 222 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 FBP2O00757 339 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 SURF4O15260 269 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 LAP3P28838 519 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 KLF10Q13118 480 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 INTS11Q5TA45 600 aaKnown RBP15.96■□□□□ 0.15
SCARF1-204ENST00000570902 SLC25A47Q6Q0C1 308 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 LRRN1Q6UXK5 716 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 SPATC1Q76KD6 591 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 PFN4Q8NHR9 129 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 LIPHQ8WWY8 451 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 RBP7Q96R05 134 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 TXNIPQ9H3M7 391 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 IL19Q9UHD0 177 aa15.96■□□□□ 0.15
SCARF1-204ENST00000570902 ABHD16AO95870 558 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 TSPAN19P0C672 248 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 IGHV4-38-2P0DP08 117 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 CD80P33681 288 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 PCGF2P35227 344 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 HNRNPA0Q13151 305 aaKnown RBP15.95■□□□□ 0.14
SCARF1-204ENST00000570902 ZNF774Q6NX45 483 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 SYT9Q86SS6 491 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 MOSPD2Q8NHP6 518 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 TAMM41Q96BW9 452 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 SIGLEC11Q96RL6 698 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 SSBP3Q9BWW4 388 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-204ENST00000570902 POLR2J2Q9GZM3 115 aaKnown RBP15.95■□□□□ 0.14
SCARF1-204ENST00000570902 POLR2J3Q9H1A7 115 aaKnown RBP15.95■□□□□ 0.14
SCARF1-204ENST00000570902 TBCCD1Q9NVR7 557 aa15.95■□□□□ 0.14
SCARF1-204ENST00000570902 LOC100653049A0A140TA62 436 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 IFNL4K9M1U5 179 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 KRT34O76011 436 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 GPANK1O95872 356 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 PLATP00750 562 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 KNG1P01042 644 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 KITLGP21583 273 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 TAS2R41P59536 307 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 CYLC2Q14093 348 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-204ENST00000570902 ZNF362Q5T0B9 420 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-204ENST00000570902 C17orf107Q6ZR85 190 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 OR10A6Q8NH74 314 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 TMEM255BQ8WV15 326 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 TMEM239Q8WW34 195 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 UPRTQ96BW1 309 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 WACQ9BTA9 647 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 KAT8Q9H7Z6 458 aaKnown RBP15.94■□□□□ 0.14
SCARF1-204ENST00000570902 C20orf141Q9NUB4 165 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 MRGBPQ9NV56 204 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 VWFP04275 2813 aa15.94■□□□□ 0.14
SCARF1-204ENST00000570902 IGHV3OR16-10A0A075B7F0 116 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 CEACAM18A8MTB9 384 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 C12orf71A8MTZ7 269 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 TMEM178BH3BS89 294 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 WNT2P09544 360 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 TOP3AQ13472 1001 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-204ENST00000570902 MAPRE2Q15555 327 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 ALG10Q5BKT4 473 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 FAM205BPQ63HN1 556 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 NANOGP8Q6NSW7 305 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 FOXL2NBQ6ZUU3 175 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 NKAIN4Q8IVV8 208 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 C10orf82Q8WW14 230 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 ITLN1Q8WWA0 313 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 TAF15Q92804 592 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCARF1-204ENST00000570902 COG8Q96MW5 612 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 BEX1Q9HBH7 125 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 MED31Q9Y3C7 131 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 CMYA5Q8N3K9 4069 aa15.93■□□□□ 0.14
SCARF1-204ENST00000570902 MRASO14807 208 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 OR5F1O95221 314 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 COX5BP10606 129 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 MSR1P21757 451 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 OMGP23515 440 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 RPL27P61353 136 aaKnown RBP15.92■□□□□ 0.14
SCARF1-204ENST00000570902 PAX2Q02962 417 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 LAPTM4AQ15012 233 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 RABL3Q5HYI8 236 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 Q6ZR03 302 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 OR4F5Q8NH21 305 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 WFDC12Q8WWY7 111 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 RAB40AQ8WXH6 277 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 CMBLQ96DG6 245 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 PLEKHA8Q96JA3 519 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 OR2V2Q96R30 315 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 ARMCX1Q9P291 453 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 RIMS3Q9UJD0 308 aa15.92■□□□□ 0.14
SCARF1-204ENST00000570902 HIF3AQ9Y2N7 669 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms