RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CYSLTR2Q9NS75 346 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 AIG1Q9NVV5 245 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SLAMF8Q9P0V8 285 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NDRG3Q9UGV2 375 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 EBF1Q9UH73 591 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RSL24D1Q9UHA3 163 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 ICAM5Q9UMF0 924 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SLC45A2Q9UMX9 530 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NPIPA1Q9UND3 350 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 MYRFQ9Y2G1 1151 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 GOLT1BQ9Y3E0 138 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NEUROG3Q9Y4Z2 214 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 CDH10Q9Y6N8 788 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 UNC80Q8N2C7 3258 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TECTAO75443 2155 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 KIAA1549Q9HCM3 1950 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 XIRP2A4UGR9 3374 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CABIN1Q9Y6J0 2220 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 PRSS51A0A1B0GVH4 220 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 A0A1W2PPC1 479 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SH3PXD2BA1X283 911 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 HYKKA2RU49 373 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 C17orf100A8MU93 164 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 DISC1C4P0D8 188 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TSTD3H0UI37 97 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 M0R3G1 203 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 FXYD1O00168 92 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 BTN3A3O00478 584 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 NME4O00746 187 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CDIPTO14735 213 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 MRASO14807 208 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SLC16A5O15375 505 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TGOLN2O43493 480 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 AIREO43918 545 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 PRAF2O60831 178 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 RNASEH1O60930 286 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 ZNF217O75362 1048 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 STK16O75716 305 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SC5DO75845 299 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CYP7B1O75881 506 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SULT1C4O75897 302 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 RGS11O94810 467 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 LRATO95237 230 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 FARS2O95363 451 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 UTS2O95399 124 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CLDN9O95484 217 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 EML2O95834 649 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 IFNA4P05014 189 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 S100A8P05109 93 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TFAP2AP05549 437 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CD5P06127 495 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CDK1P06493 297 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 RAP2AP10114 183 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ANXA3P12429 323 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 GP9P14770 177 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 HLA-GP17693 338 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CSNK2A2P19784 350 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 EDN2P20800 178 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 EFNA1P20827 205 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 TACR1P25103 407 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 AK4P27144 223 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 ELK4P28324 431 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ERP29P30040 261 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 SSTR2P30874 369 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 GNRHRP30968 328 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SSTR5P35346 364 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 GNPDA1P46926 289 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 OR3A1P47881 315 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 PTTG1IPP53801 180 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 PCBP3P57721 371 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 KCNK10P57789 538 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 LOXL3P58215 753 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 UBE2KP61086 200 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ERVK11-1P61568 191 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TBPL1P62380 186 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 HPCAP84074 193 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 FAM3AP98173 230 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CDKL1Q00532 357 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 HHEXQ03014 270 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 DBPQ10586 325 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 APOFQ13790 326 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 GK3PQ14409 553 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 MLF2Q15773 248 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 PGGHGQ32M88 737 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 TMEM176BQ3YBM2 270 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 ACSM3Q53FZ2 586 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SFT2D3Q587I9 215 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 PDZD11Q5EBL8 140 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ARMCX4Q5H9R4 360 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 SAMD4BQ5PRF9 694 aaKnown RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 OTUD3Q5T2D3 398 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 LIPKQ5VXJ0 399 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 STUMQ69YW2 141 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 CYB5R2Q6BCY4 276 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 ZNF770Q6IQ21 691 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 PRR27Q6MZM9 219 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 OGFOD2Q6N063 350 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 C8orf82Q6P1X6 216 aaPredicted RBP3.18□□□□□ -1.9
SMG6-208ENST00000570874 AGTRAPQ6RW13 159 aa3.18□□□□□ -1.9
SMG6-208ENST00000570874 BTNL8Q6UX41 500 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms