RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 UGT2A3Q6UWM9 527 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 CDC20BQ86Y33 519 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 OR1J2Q8NGS2 313 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 OR6N2Q8NGY6 317 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 OR52N5Q8NH56 324 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 CNBD2Q96M20 576 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 OR2H1Q9GZK4 316 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 TPRKBQ9Y3C4 175 aa20.46■□□□□ 0.87
RAB40C-212ENST00000569575 SGCEO43556 437 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 IGLV1-44P01699 117 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 HLA-HP01893 362 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 SPARCP09486 303 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 ALOX5APP20292 161 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 PTAFRP25105 342 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 DCKP27707 260 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 SLC15A1P46059 708 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 RAB35Q15286 201 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 MEP1BQ16820 701 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 RBM48Q5RL73 367 aaKnown RBP20.45■□□□□ 0.86
RAB40C-212ENST00000569575 DPY19L4Q7Z388 723 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 OR51G2Q8NGK0 314 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 FOXN4Q96NZ1 517 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 JAM3Q9BX67 310 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 LAMP5Q9UJQ1 280 aa20.45■□□□□ 0.86
RAB40C-212ENST00000569575 GDF2Q9UK05 429 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-212ENST00000569575 FLNCQ14315 2725 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 PRSS44E7EML9 344 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 GPANK1O95872 356 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 LYNP07948 512 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 CRYGSP22914 178 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 PSG4Q00888 419 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 ELFN2Q5R3F8 820 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 TMEM108Q6UXF1 575 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 MDP1Q86V88 176 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 ZNF75AQ96N20 296 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 DCLRE1CQ96SD1 692 aaKnown RBP20.44■□□□□ 0.86
RAB40C-212ENST00000569575 COQ7Q99807 217 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 ESRP2Q9H6T0 727 aaKnown RBP20.44■□□□□ 0.86
RAB40C-212ENST00000569575 NIPAL2Q9H841 368 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 FGF20Q9NP95 211 aaPredicted RBP20.44■□□□□ 0.86
RAB40C-212ENST00000569575 PLEK2Q9NYT0 353 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 KCNN3Q9UGI6 736 aa20.44■□□□□ 0.86
RAB40C-212ENST00000569575 ZNF670-ZNF695F2Z2N8 137 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 SELENOFO60613 162 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 APOC1P02654 83 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 RNF224P0DH78 156 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 GRNP28799 593 aaKnown RBP20.43■□□□□ 0.86
RAB40C-212ENST00000569575 NR1H2P55055 460 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 EGR3Q06889 387 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 DAZAP2Q15038 168 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-212ENST00000569575 UNQ6126/PRO20091Q6UXV3 157 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 KCTD20Q7Z5Y7 419 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 SLC35F2Q8IXU6 374 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 C1orf174Q8IYL3 243 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 ACBD7Q8N6N7 88 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 RADILQ96JH8 1075 aa20.43■□□□□ 0.86
RAB40C-212ENST00000569575 DDX28Q9NUL7 540 aaKnown RBP20.43■□□□□ 0.86
RAB40C-212ENST00000569575 HELZ2Q9BYK8 2649 aaKnown RBP20.42■□□□□ 0.86
RAB40C-212ENST00000569575 ANKHD1Q8IWZ3 2542 aaKnown RBP20.42■□□□□ 0.86
RAB40C-212ENST00000569575 OR6C6A6NF89 314 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 J3QRE1 110 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 ZNF254O75437 659 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 THBDP07204 575 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 ZNF14P17017 642 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-212ENST00000569575 DCTDP32321 178 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 PIGFQ07326 219 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 EIF2B1Q14232 305 aaKnown RBP20.42■□□□□ 0.86
RAB40C-212ENST00000569575 BEX5Q5H9J7 111 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 PABPC1L2AQ5JQF8 200 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 SEZ6L2Q6UXD5 910 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 DCXRQ7Z4W1 244 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 HAVCR2Q8TDQ0 301 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 ST7LQ8TDW4 575 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 RNF133Q8WVZ7 376 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 LGALS12Q96DT0 336 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 ABHD6Q9BV23 337 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 AASSQ9UDR5 926 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 PSORS1C1Q9UIG5 152 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 LRCH1Q9Y2L9 728 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 RELNP78509 3460 aa20.42■□□□□ 0.86
RAB40C-212ENST00000569575 ZNF878C9JN71 531 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 SLC1A7O00341 560 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 RER1O15258 196 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 MRPS14O60783 128 aaKnown RBP20.41■□□□□ 0.86
RAB40C-212ENST00000569575 FAM20BO75063 409 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 IGHA1P01876 353 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 APLNRP35414 380 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 NAA10P41227 235 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-212ENST00000569575 GRB2P62993 217 aaKnown RBP20.41■□□□□ 0.86
RAB40C-212ENST00000569575 ROM1Q03395 351 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 SMN1Q16637 294 aaKnown RBP20.41■□□□□ 0.86
RAB40C-212ENST00000569575 LAIR2Q6ISS4 152 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 ARL9Q6T311 187 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 LYPD4Q6UWN0 246 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 B3GLCTQ6Y288 498 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 VASH1Q7L8A9 365 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-212ENST00000569575 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-212ENST00000569575 BPIFB6Q8NFQ5 453 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 OR1F12Q8NHA8 337 aa20.41■□□□□ 0.86
RAB40C-212ENST00000569575 FGFBP3Q8TAT2 258 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms