RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 TNFAIP6P98066 277 aaPredicted RBP4.86□□□□□ -1.63
CDH13-212ENST00000569144 EGR4Q05215 589 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 PTGR1Q14914 329 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 TMEM255AQ5JRV8 349 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 THEM4Q5T1C6 240 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 TMEM53Q6P2H8 277 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 CRIP3Q6Q6R5 217 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 H1FNTQ75WM6 255 aaPredicted RBP4.86□□□□□ -1.63
CDH13-212ENST00000569144 DPPA2Q7Z7J5 298 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 KLBQ86Z14 1044 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 UEVLDQ8IX04 471 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 RIMKLAQ8IXN7 391 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 CLECL1Q8IZS7 167 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 SLC22A24Q8N4F4 322 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 FITM2Q8N6M3 262 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 OR6N1Q8NGY5 312 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 ZNF503Q96F45 646 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 PLEKHA8Q96JA3 519 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 SAMD8Q96LT4 415 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 TRNT1Q96Q11 434 aaKnown RBP4.86□□□□□ -1.63
CDH13-212ENST00000569144 ARHGDIGQ99819 225 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 B9D2Q9BPU9 175 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 EMC6Q9BV81 110 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 SLC19A3Q9BZV2 496 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 ROPN1BQ9BZX4 212 aaPredicted RBP4.86□□□□□ -1.63
CDH13-212ENST00000569144 DPY30Q9C005 99 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 TRIM15Q9C019 465 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 SLC38A1Q9H2H9 487 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 DPAGT1Q9H3H5 408 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 ROPN1Q9HAT0 212 aaPredicted RBP4.86□□□□□ -1.63
CDH13-212ENST00000569144 TMEM165Q9HC07 324 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 ACOXLQ9NUZ1 547 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 SLC17A7Q9P2U7 560 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 MIOXQ9UGB7 285 aa4.86□□□□□ -1.63
CDH13-212ENST00000569144 TANC2Q9HCD6 1990 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 CENPVL3A0A0U1RRI6 287 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 IQCMA0A1B0GVH7 501 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 CDHR4A6H8M9 788 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 ZNF726A6NNF4 738 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 H3BSA7 217 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 RNASET2O00584 256 aaKnown RBP4.85□□□□□ -1.63
CDH13-212ENST00000569144 TYROBPO43914 113 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 SPAG7O75391 227 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 FARS2O95363 451 aaKnown RBP4.85□□□□□ -1.63
CDH13-212ENST00000569144 HLA-DOBP13765 273 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 NCF2P19878 526 aaPredicted RBP4.85□□□□□ -1.63
CDH13-212ENST00000569144 TNFSF4P23510 183 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 GRPRP30550 384 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 APLNRP35414 380 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 CFHR2P36980 270 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 TGFBR2P37173 567 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 CSNK1A1P48729 337 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 IFFO1Q0D2I5 559 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 SYPL1Q16563 259 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 KRT71Q3SY84 523 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 SLC36A2Q495M3 483 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 LIN52Q52LA3 116 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 XKR7Q5GH72 579 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 TNFAIP8L3Q5GJ75 292 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 DEFB121Q5J5C9 76 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 CFAP157Q5JU67 520 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 SPATA46Q5T0L3 261 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 FAM69AQ5T7M9 428 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 ATG16L1Q676U5 607 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 C11orf88Q6PI97 169 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 C5orf46Q6UWT4 87 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 UNQ6126/PRO20091Q6UXV3 157 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 NHLRC1Q6VVB1 395 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 LRRC74BQ6ZQY2 392 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 NET1Q7Z628 596 aaPredicted RBP4.85□□□□□ -1.63
CDH13-212ENST00000569144 PTOV1Q86YD1 416 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 C10orf107Q8IVU9 208 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 PQLC1Q8N2U9 271 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 MIER2Q8N344 545 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 KRTCAP2Q8N6L1 136 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 ANKFN1Q8N957 763 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 CCDC63Q8NA47 563 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 VPS37AQ8NEZ2 397 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 VANGL1Q8TAA9 524 aaPredicted RBP4.85□□□□□ -1.63
CDH13-212ENST00000569144 SLC25A40Q8TBP6 338 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 KLF14Q8TD94 323 aaPredicted RBP4.85□□□□□ -1.63
CDH13-212ENST00000569144 TCP10LQ8TDR4 215 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 NRG4Q8WWG1 115 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 SLC38A4Q969I6 547 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 PPP3R2Q96LZ3 170 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 SH3GL3Q99963 347 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 PCGF1Q9BSM1 259 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 TOR3AQ9H497 397 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 MTHFD2LQ9H903 347 aaPredicted RBP4.85□□□□□ -1.63
CDH13-212ENST00000569144 RNF121Q9H920 327 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 TMEM38BQ9NVV0 291 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 RLIMQ9NVW2 624 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 VPREB3Q9UKI3 123 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 PPP1R3CQ9UQK1 317 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 FIS1Q9Y3D6 152 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 DNAJC15Q9Y5T4 150 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 USH1CQ9Y6N9 552 aa4.85□□□□□ -1.63
CDH13-212ENST00000569144 TRAV36DV7A0A075B6V5 113 aa4.84□□□□□ -1.63
CDH13-212ENST00000569144 A0A087WUJ7 227 aa4.84□□□□□ -1.63
CDH13-212ENST00000569144 IGHV1-69DA0A0B4J2H0 117 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms