RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 POP5Q969H6 163 aaKnown RBP17.34■□□□□ 0.37
CLK3-225ENST00000569063 MSI2Q96DH6 328 aaKnown RBP17.34■□□□□ 0.37
CLK3-225ENST00000569063 C4orf45Q96LM5 186 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 SNX18Q96RF0 628 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 TRIM15Q9C019 465 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 C1orf21Q9H246 121 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 RERGLQ9H628 205 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 ELOVL3Q9HB03 270 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 LYVE1Q9Y5Y7 322 aa17.34■□□□□ 0.37
CLK3-225ENST00000569063 H3BSA7 217 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 SGCEO43556 437 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 IDH3BO43837 385 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 NCR1O76036 304 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 NGFP01138 241 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 MT-ND5P03915 603 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 GCH1P30793 250 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 MAGEB1P43366 347 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 ARHGDIAP52565 204 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 MS4A2Q01362 244 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 CHRFAM7AQ494W8 412 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 ARL9Q6T311 187 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 RFPL4BQ6ZWI9 263 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 ABHD4Q8TB40 342 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 SLC25A40Q8TBP6 338 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 KLF14Q8TD94 323 aaPredicted RBP17.33■□□□□ 0.36
CLK3-225ENST00000569063 SAMD8Q96LT4 415 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 OR2J1Q9GZK6 312 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 CDC42EP3Q9UKI2 254 aa17.33■□□□□ 0.36
CLK3-225ENST00000569063 LRP5LA4QPB2 252 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 KIAA1324LA8MWY0 1029 aaPredicted RBP17.32■□□□□ 0.36
CLK3-225ENST00000569063 TNFRSF11BO00300 401 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 DOK2O60496 412 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 MPV17P39210 176 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 MMP15P51511 669 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 TMEM33P57088 247 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 PPP1CBP62140 327 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 TMEM255AQ5JRV8 349 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 SPATA46Q5T0L3 261 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 FAM166AQ6J272 317 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 LEG1Q6P5S2 330 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 DNM1P34Q6PK57 102 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 ZNF620Q6ZNG0 422 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 VASH1Q7L8A9 365 aaPredicted RBP17.32■□□□□ 0.36
CLK3-225ENST00000569063 OR4C15Q8NGM1 316 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 IPCEF1Q8WWN9 437 aaPredicted RBP17.32■□□□□ 0.36
CLK3-225ENST00000569063 YIPF5Q969M3 257 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 TSSK2Q96PF2 358 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 NMNAT3Q96T66 252 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 IFT27Q9BW83 186 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 TBCCD1Q9NVR7 557 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 TAS2R1Q9NYW7 299 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 ASH2LQ9UBL3 628 aa17.32■□□□□ 0.36
CLK3-225ENST00000569063 IGLV1-36A0A0B4J1U3 117 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 LOC100289279A0A1B0GTE1 492 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 DCTN6O00399 190 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 LMX1BO60663 402 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 RP2O75695 350 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 HIST1H1CP16403 213 aaKnown RBP17.31■□□□□ 0.36
CLK3-225ENST00000569063 TUBG1P23258 451 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 HTR5AP47898 357 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 CCL8P80075 99 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 TRIP10Q15642 601 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 ZNF770Q6IQ21 691 aaPredicted RBP17.31■□□□□ 0.36
CLK3-225ENST00000569063 RPL13AP3Q6NVV1 102 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 PGM2L1Q6PCE3 622 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 JAZF1Q86VZ6 243 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 OR6V1Q8N148 313 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 ASB9Q96DX5 294 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 BTBD10Q9BSF8 475 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 SOX7Q9BT81 388 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 TUBG2Q9NRH3 451 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 ZNF275Q9NSD4 429 aaPredicted RBP17.31■□□□□ 0.36
CLK3-225ENST00000569063 PLEK2Q9NYT0 353 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 B9D1Q9UPM9 204 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 RTTNQ86VV8 2226 aa17.31■□□□□ 0.36
CLK3-225ENST00000569063 OR6C6A6NF89 314 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 ABHD16AO95870 558 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 RENP00797 406 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 GAAP10253 952 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 NOS3P29474 1203 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 IL2RGP31785 369 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 LIPAP38571 399 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 GLO1Q04760 184 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 FAM98BQ52LJ0 330 aaKnown RBP17.3■□□□□ 0.36
CLK3-225ENST00000569063 CCDC92Q53HC0 331 aaPredicted RBP17.3■□□□□ 0.36
CLK3-225ENST00000569063 OTPQ5XKR4 325 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 NPEPL1Q8NDH3 523 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 OR9Q2Q8NGE9 314 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 OR4K13Q8NH42 304 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 GTF3AQ92664 365 aaKnown RBP17.3■□□□□ 0.36
CLK3-225ENST00000569063 C1orf159Q96HA4 380 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 RACGAP1Q9H0H5 632 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 SRA1Q9HD15 236 aaKnown RBP17.3■□□□□ 0.36
CLK3-225ENST00000569063 CYSLTR2Q9NS75 346 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 LPAR3Q9UBY5 353 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 CGGBP1Q9UFW8 167 aaPredicted RBP17.3■□□□□ 0.36
CLK3-225ENST00000569063 ATPIF1Q9UII2 106 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 KLHL21Q9UJP4 597 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 KCNS2Q9ULS6 477 aa17.3■□□□□ 0.36
CLK3-225ENST00000569063 CCNB2O95067 398 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms