RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
CNOT1-213ENST00000568158 MED20Q9H944 212 aa11.21□□□□□ -0.61
CNOT1-213ENST00000568158 CMAHPQ9Y471 501 aa11.21□□□□□ -0.61
CNOT1-213ENST00000568158 FAM183AA6NL82 134 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 B9A039 149 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 H3BNX3 289 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 RER1O15258 196 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 SGCEO43556 437 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 IGHV4-39P01824 125 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 HLA-DQA2P01906 255 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 ZNF23P17027 643 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 GDI2P50395 445 aaKnown RBP11.2□□□□□ -0.62
CNOT1-213ENST00000568158 CRISP1P54107 249 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 UCP2P55851 309 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 ERVS71-1P61550 626 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 RAB35Q15286 201 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 Q5PR19 223 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 LYPD4Q6UWN0 246 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 LINC00346Q8IVM7 164 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 ZCCHC24Q8N2G6 241 aaKnown RBP11.2□□□□□ -0.62
CNOT1-213ENST00000568158 SVOPLQ8N434 492 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 ZNF511Q8NB15 262 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 SLC26A10Q8NG04 563 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 SLC7A6Q92536 515 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 OTULINQ96BN8 352 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 WACQ9BTA9 647 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 RBM4Q9BWF3 364 aaKnown RBP11.2□□□□□ -0.62
CNOT1-213ENST00000568158 HCAR1Q9BXC0 346 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 MRPL37Q9BZE1 423 aaKnown RBP11.2□□□□□ -0.62
CNOT1-213ENST00000568158 NMNAT2Q9BZQ4 307 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 CMC2Q9NRP2 79 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 MRPL22Q9NWU5 206 aaKnown RBP11.2□□□□□ -0.62
CNOT1-213ENST00000568158 ASH2LQ9UBL3 628 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 LHFPL6Q9Y693 200 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 PMF1-BGLAPU3KQ54 211 aa11.2□□□□□ -0.62
CNOT1-213ENST00000568158 MAP1AP78559 2803 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 RIIAD1A6NNX1 92 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 SNAP29O95721 258 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 CLPTM1O96005 669 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 NGFP01138 241 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 LCKP06239 509 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 FCGR1AP12314 374 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 WNT5AP41221 380 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 RAD52P43351 418 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 GLO1Q04760 184 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 SCRN3Q0VDG4 424 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 AQP6Q13520 282 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 EFNB3Q15768 340 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 SLC27A4Q6P1M0 643 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 TMEM154Q6P9G4 183 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 PRSS57Q6UWY2 283 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 VASH1Q7L8A9 365 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 ZDHHC13Q8IUH4 622 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 ICA1LQ8NDH6 482 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 PROKR2Q8NFJ6 384 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 OR10H5Q8NGA6 315 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 OR2T4Q8NH00 348 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 MRPL24Q96A35 216 aaKnown RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 CENPNQ96H22 339 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 Q96MF0 132 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 RAB3IPQ96QF0 476 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 CDADC1Q9BWV3 514 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 PLK3Q9H4B4 646 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 PAPOLBQ9NRJ5 636 aaKnown RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 PLEK2Q9NYT0 353 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 KIF17Q9P2E2 1029 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 MYEF2Q9P2K5 600 aaKnown RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 EIF3KQ9UBQ5 218 aaKnown RBP11.19□□□□□ -0.62
CNOT1-213ENST00000568158 DUSP13Q9UII6 198 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 POLR1DQ9Y2S0 133 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
CNOT1-213ENST00000568158 SAC3D1A6NKF1 404 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 SYNGR3O43761 229 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 SSX4O60224 188 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 DOK2O60496 412 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 LY6HO94772 140 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 IFNGP01579 166 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 DBHP09172 617 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 COX5BP10606 129 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 ZNF823P16415 610 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 SPI1P17947 270 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 PCSK6P29122 969 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 EPHA2P29317 976 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 GGT2P36268 569 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 RPS27P42677 84 aaKnown RBP11.18□□□□□ -0.62
CNOT1-213ENST00000568158 HTR5AP47898 357 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 SLC25A1P53007 311 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 HIST1H3AP68431 136 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 PTGES3Q15185 160 aaKnown RBP11.18□□□□□ -0.62
CNOT1-213ENST00000568158 RSPO1Q2MKA7 263 aaPredicted RBP11.18□□□□□ -0.62
CNOT1-213ENST00000568158 HIST2H3PS2Q5TEC6 136 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 KDM4DQ6B0I6 523 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 RGS7BPQ6MZT1 257 aaPredicted RBP11.18□□□□□ -0.62
CNOT1-213ENST00000568158 HIST2H3AQ71DI3 136 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 ZNF101Q8IZC7 436 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 GJC3Q8NFK1 279 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 OR1J1Q8NGS3 322 aa11.18□□□□□ -0.62
CNOT1-213ENST00000568158 OR1F12Q8NHA8 337 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms