RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 OTPQ5XKR4 325 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 CD276Q5ZPR3 534 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 DNM1P34Q6PK57 102 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 ZNF474Q6S9Z5 364 aaPredicted RBP6.78□□□□□ -1.32
SMG1-214ENST00000568038 B3GLCTQ6Y288 498 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 Q6ZT83 130 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 USP51Q70EK9 711 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 ABHD12BQ7Z5M8 362 aaPredicted RBP6.78□□□□□ -1.32
SMG1-214ENST00000568038 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.78□□□□□ -1.32
SMG1-214ENST00000568038 MRGPRGQ86SM5 289 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 CXorf67Q86X51 503 aaPredicted RBP6.78□□□□□ -1.32
SMG1-214ENST00000568038 SETD9Q8NE22 299 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 PROKR2Q8NFJ6 384 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 OR6K6Q8NGW6 343 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 OR2T4Q8NH00 348 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 LILRB4Q8NHJ6 448 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 RHOXF1Q8NHV9 184 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 CNIH3Q8TBE1 160 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 FNDC8Q8TC99 324 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 CA5BP1Q8WTZ4 195 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 TRUB1Q8WWH5 349 aaKnown RBP6.78□□□□□ -1.32
SMG1-214ENST00000568038 ASB5Q8WWX0 329 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 CNBD2Q96M20 576 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 ZNF582Q96NG8 517 aaPredicted RBP6.78□□□□□ -1.32
SMG1-214ENST00000568038 NMNAT2Q9BZQ4 307 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 Q9H521 79 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 CLN6Q9NWW5 311 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 MALT1Q9UDY8 824 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 PFDN2Q9UHV9 154 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 RAB26Q9ULW5 256 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 B9D1Q9UPM9 204 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 FKBP7Q9Y680 259 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 BSNQ9UPA5 3926 aa6.78□□□□□ -1.32
SMG1-214ENST00000568038 NBASA2RRP1 2371 aa6.77□□□□□ -1.32
SMG1-214ENST00000568038 BOD1L1Q8NFC6 3051 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 CCDC182A6NF36 153 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 TVP23AA6NH52 213 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 A8MXE2 369 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 ZNF99A8MXY4 864 aaPredicted RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 RPL36A-HNRNPH2H7BZ11 118 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 J3QKU1 62 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 MPZL2O60487 215 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 ENTPD6O75354 484 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 RAD51DO75771 328 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 AGFG2O95081 481 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 MPZL1O95297 269 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 B4GALT1P15291 398 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 GABRB1P18505 474 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 SLC2A5P22732 501 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 LAP3P28838 519 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 FMO3P31513 532 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 GUCA1AP43080 201 aaPredicted RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 ZNF133P52736 654 aaPredicted RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 NUDT6P53370 316 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 CDH11P55287 796 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 ISL1P61371 349 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 SNRPGP62308 76 aaKnown RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 FAM27E3Q08E93 113 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 SMN1Q16637 294 aaKnown RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 MEP1BQ16820 701 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 SLC25A35Q3KQZ1 300 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 C10orf128Q5T292 105 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 AADACL4Q5VUY2 407 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 NXNL2Q5VZ03 156 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 KLHL24Q6TFL4 600 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 ZNF813Q6ZN06 617 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 SPATC1Q76KD6 591 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 MEPCEQ7L2J0 689 aaKnown RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 ZBTB46Q86UZ6 589 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 GABRG1Q8N1C3 465 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 ZNF433Q8N7K0 673 aaPredicted RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 APH1BQ8WW43 257 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 ITLN2Q8WWU7 325 aaPredicted RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 ZMYND19Q96E35 227 aaPredicted RBP6.77□□□□□ -1.33
SMG1-214ENST00000568038 TEAD3Q99594 435 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 FOXB1Q99853 325 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 ANKRD60Q9BZ19 345 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 AMBNQ9NP70 447 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 GALNT8Q9NY28 637 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 TAS2R16Q9NYV7 291 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 JKAMPQ9P055 326 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 UGT2A1Q9Y4X1 527 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 HSPE1-MOB4S4R3N1 261 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 PCNX1Q96RV3 2341 aa6.77□□□□□ -1.33
SMG1-214ENST00000568038 DIDO1Q9BTC0 2240 aaKnown RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 A0A1W2PR80 420 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 DENRO43583 198 aaKnown RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 WBP4O75554 376 aaKnown RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 GLCEO94923 617 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 APOL3O95236 402 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 KNG1P01042 644 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 TFP02787 698 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 MRPL3P09001 348 aaKnown RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 COX5AP20674 150 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 MSR1P21757 451 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 MYF6P23409 242 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 IL32P24001 234 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 CD79BP40259 229 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 NAA10P41227 235 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms