RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 DCKP27707 260 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 CRMP1Q14194 572 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 ZNF362Q5T0B9 420 aaPredicted RBP11.71□□□□□ -0.53
CLK3-218ENST00000566926 PRSS57Q6UWY2 283 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 IGFN1Q86VF2 1251 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 FAM169BQ8N8A8 192 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 NPEPL1Q8NDH3 523 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 LILRB1Q8NHL6 650 aaPredicted RBP11.71□□□□□ -0.53
CLK3-218ENST00000566926 ZNF519Q8TB69 540 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 GGHQ92820 318 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
CLK3-218ENST00000566926 SLC25A44Q96H78 314 aaPredicted RBP11.71□□□□□ -0.53
CLK3-218ENST00000566926 TMEM80Q96HE8 168 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 Q96M85 177 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 TSPAN32Q96QS1 320 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 SIGLEC11Q96RL6 698 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 CDCA4Q9BXL8 241 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 INPP5EQ9NRR6 644 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 NDUFA13Q9P0J0 144 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.53
CLK3-218ENST00000566926 CELSR1Q9NYQ6 3014 aa11.71□□□□□ -0.54
CLK3-218ENST00000566926 TEP1Q99973 2627 aaKnown RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 A0A096LPE4 126 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 A0A1W2PPZ6 126 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 PRSS37A4D1T9 235 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 SLC2A10O95528 541 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 IGHG1P01857 330 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 CD99P14209 185 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 ATP6V1B1P15313 513 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 PAX1P15863 534 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 MYL12AP19105 171 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 CRABP1P29762 137 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 CAPZA2P47755 286 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 NUDT6P53370 316 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 ACTC1P68032 377 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 ACTA1P68133 377 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 ADAM8P78325 824 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 ST3GAL4Q11206 333 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 TBCEQ15813 527 aaPredicted RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 AGAP6Q5VW22 663 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 LEG1Q6P5S2 330 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 DNM1P34Q6PK57 102 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 SPARTQ8N0X7 666 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 SDR9C7Q8NEX9 313 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 IGFBPL1Q8WX77 278 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 NANOS1Q8WY41 292 aaKnown RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 TMEM54Q969K7 222 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 RNFT2Q96EX2 444 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 ALG12Q9BV10 488 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 JAM3Q9BX67 310 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 NMNAT2Q9BZQ4 307 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 CCDC90BQ9GZT6 254 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 RACGAP1Q9H0H5 632 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 FGF20Q9NP95 211 aaPredicted RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 CHCHD3Q9NX63 227 aaKnown RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 VSX1Q9NZR4 365 aaPredicted RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 CRNNQ9UBG3 495 aaPredicted RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 AASSQ9UDR5 926 aa11.7□□□□□ -0.54
CLK3-218ENST00000566926 ZNF346Q9UL40 294 aaKnown RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 DIMT1Q9UNQ2 313 aaKnown RBP11.7□□□□□ -0.54
CLK3-218ENST00000566926 RAB36O95755 333 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 CRYAAP02489 173 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 DANCRP0C864 163 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 CBR1P16152 277 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 JUNBP17275 347 aaPredicted RBP11.69□□□□□ -0.54
CLK3-218ENST00000566926 SLC2A5P22732 501 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ATP6V1E1P36543 226 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ARR3P36575 388 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ACVR1BP36896 505 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 PTH2RP49190 550 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 CLRN1P58418 232 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
CLK3-218ENST00000566926 GGTLC2Q14390 218 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 MESTQ5EB52 335 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 PHYHD1Q5SRE7 291 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ZNF544Q6NX49 715 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ZNF627Q7L945 461 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 EGFL6Q8IUX8 553 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 FBXL14Q8N1E6 418 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 IL17RDQ8NFM7 739 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ASB10Q8WXI3 467 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 PTP4A1Q93096 173 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 OTULINQ96BN8 352 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 RASD2Q96D21 266 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 PERPQ96FX8 193 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 NMNAT3Q96T66 252 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 DDOQ99489 341 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 MNTQ99583 582 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 TEAD3Q99594 435 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 FOXB1Q99853 325 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 DHRS9Q9BPW9 319 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 AMBNQ9NP70 447 aa11.69□□□□□ -0.54
CLK3-218ENST00000566926 ZNF701Q9NV72 531 aaPredicted RBP11.69□□□□□ -0.54
CLK3-218ENST00000566926 PAK1IP1Q9NWT1 392 aaPredicted RBP11.69□□□□□ -0.54
CLK3-218ENST00000566926 EXOGQ9Y2C4 368 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms