RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ACSM3Q53FZ2 586 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MRM1Q6IN84 353 aaKnown RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 TNFAIP8L2Q6P589 184 aaPredicted RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 OR10J5Q8NHC4 309 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 FAM3CQ92520 227 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 TAAR8Q969N4 342 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 RAB3CQ96E17 227 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MED8Q96G25 268 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ALG8Q9BVK2 526 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 SMIM3Q9BZL3 60 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 TMEM231Q9H6L2 316 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 A4GALTQ9NPC4 353 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 KCNE5Q9UJ90 142 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 TCFL5Q9UL49 500 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 C20orf202A1L168 122 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 OR2F2O95006 317 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 SOX14O95416 240 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 CH25HO95992 272 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ACTL6AO96019 429 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 DLSTP36957 453 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 UQCRFS1P47985 274 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 GABRA4P48169 554 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ACTA2P62736 377 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ACTG2P63267 376 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ACTC1P68032 377 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ACTA1P68133 377 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 OR2F1Q13607 317 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 RBM39Q14498 530 aaKnown RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 TOMM34Q15785 309 aaPredicted RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 PRAMEF20Q5VT98 475 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NIPAL3Q6P499 406 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MEPCEQ7L2J0 689 aaKnown RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 ZNF619Q8N2I2 560 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MUC15Q8N387 334 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 TMEM239Q8WW34 195 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NUS1Q96E22 293 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MYEOVQ96EZ4 313 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ARHGDIGQ99819 225 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 POTEKPQ9BYX7 375 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 GAR1Q9NY12 217 aaKnown RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 GGT3PA6NGU5 568 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 C4orf47A7E2U8 309 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MED6O75586 246 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ADH1BP00325 375 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 PRNPP04156 253 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 EPXP11678 715 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 SULT1A2P50226 295 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NAAAQ02083 359 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 DMKNQ6E0U4 476 aaPredicted RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 ESPNLQ6ZVH7 1005 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MMP21Q8N119 569 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NHLRC2Q8NBF2 726 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 OR5M8Q8NGP6 311 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 LGALS14Q8TCE9 139 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NUDCD2Q8WVJ2 157 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 GJD4Q96KN9 370 aaPredicted RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 MACROD1Q9BQ69 325 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 PAAF1Q9BRP4 392 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 COMMD5Q9GZQ3 224 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 SEC61A2Q9H9S3 476 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 PARD6AQ9NPB6 346 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MMP26Q9NRE1 261 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MTCH2Q9Y6C9 303 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 OGG1O15527 345 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 CD74P04233 296 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MELTFP08582 738 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ANXA4P09525 319 aaPredicted RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 SFTA3P0C7M3 94 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 PIRTP0C851 137 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 IGFBP4P22692 258 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 AK4P27144 223 aaPredicted RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 ABCD3P28288 659 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NHLH2Q02577 135 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ZXDCQ2QGD7 858 aaPredicted RBP2.66□□□□□ -1.98
CHD9-218ENST00000566029 MESTQ5EB52 335 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NKAIN2Q5VXU1 208 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 OGFOD3Q6PK18 319 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ACOT7LQ6ZUV0 252 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 TOP6BLQ8N6T0 577 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 EXD3Q8N9H8 876 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MVB12AQ96EY5 273 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 OR51I1Q9H343 314 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 PADI1Q9ULC6 663 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MYLKQ15746 1914 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 TRAV1-2A0A0B4J238 106 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 PRAMEF11O60813 436 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 STK16O75716 305 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 INHAP05111 366 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 CDK2P24941 298 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 RAP1AP62834 184 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 ARHGAP1Q07960 439 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 RAB31Q13636 194 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 COX20Q5RI15 118 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 NCMAPQ5T1S8 102 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 C9orf57Q5W0N0 161 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 OR4A47Q6IF82 309 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 CD164L2Q6UWJ8 174 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 PRRC1Q96M27 445 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 TMEM9BQ9NQ34 198 aa2.66□□□□□ -1.98
CHD9-218ENST00000566029 MED17Q9NVC6 651 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms